ViewGene
Locus Name:
GeneID:
Location:

GeneID:5472
TrivialName: PA14_12240
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_12240
PAO1 Ortholog Locus:
Sequence Length:243
Protein Length:80
Start: 1056032
Stop: 1056274
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGTCCGGCGGCGAGGCGAACATCATGAACAGGCGGCAGGTATCGGCACCGTACTGGTCGATCATCGATTGC
GGGTCGACGCCGTTGTTCTTCGACTTCGACATCTTCTCGGTGCCGCCGATCTCGACCGGCTGGCCGTCGCTC
TTCAGGCGTGCGCCGACGACCTTGGCCTTGGCGTCACGCTCGACCTCGACGTCGGCCGGGTTGAACCAGTCC
TTGCCGCCGTTGGCGGTGGTCCGGTAG
Translation:
MSGGEANIMNRRQVSAPYWSIIDCGSTPLFFDFDIFSVPPISTGWPSLFRRAPTTLALASRSTSTSAGLNQS
LPPLAVVR*
AnnotationID:5477GeneID:5472
AnnotatorUID: urbach
Modification Date/Time: 2004-09-01 12:12:18
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:






   
Genomic Context:






   
Comment:


















    ReferenceID:10939




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:28086




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 48474How Found: BLASTX

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: psyr_15may02_Scaffold4_revised_gene533Glimmer Score: 

          
Start: 3897906Stop: 3897664

          
Length: 243


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: psyr_15may02_Scaffold4_revised_gene5336Homolog Bit Score 113.0

          
Other Homologs:  

          
GC ORF Sequence

           
ATGTCCGGCGGCGAGGCGAACATCATGAACAGGCGGCAGGTATCGGCACCGTACTGGTCGATCATCGATTGC 
GGGTCGACGCCGTTGTTCTTCGACTTCGACATCTTCTCGGTGCCGCCGATCTCGACCGGCTGGCCGTCGCTC 
TTCAGGCGTGCGCCGACGACCTTGGCCTTGGCGTCACGCTCGACCTCGACGTCGGCCGGGTTGAACCAGTCC 
TTGCCGCCGTTGGCGGTGGTCCGGTAG