ViewGene

Locus Name:
GeneID:
Location:

GeneID:4862
TrivialName: PA14_51940
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_51940
PAO1 Ortholog Locus:PA0952
Sequence Length:384
Protein Length:127
Start: 4611911
Stop: 4612294
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG04341.1|AE004529_7 (AE004529) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 127/127 (100%), Positives = 127/127 (100%)
Sequence:
ATGAAAGACCATCTGATCGGAAGCGTCCCCGCACACCTGGTGGATGCCGCACGCCCGACCCTGACAGCCCAC
GAGGGCCTGGTCGCGGACTACAACATTGCCGCCTGGCTACATCTTCCGGATGCCTGCGACCTGCTGGTGTCA
CTGGTGGTCAGCTATCTGGATGGCGGGCGCCAGCGCGAAGTGGCGGTGGATCACGGACGAATCGACCGCCAG
CAACGCATCCTGCTTTCCGGCATTGCCCGCCTGCCCGTACGGCAGAAAGTGGAGAACATGCAGGTACGCCTG
AAGTCGGCGACGGCCTTTTCCCGACTGGTCGTGGAGGAGTTCTTCGTACAAGCGGTGGAGCAGGAAAACAGG
TCACAGCAGGTGTCCGAAGCTTGA
Translation:
MKDHLIGSVPAHLVDAARPTLTAHEGLVADYNIAAWLHLPDACDLLVSLVVSYLDGGRQREVAVDHGRIDRQ
QRILLSGIARLPVRQKVENMQVRLKSATAFSRLVVEEFFVQAVEQENRSQQVSEA*
AnnotationID:4867GeneID:4862
AnnotatorUID: danlee
Modification Date/Time: 2004-05-11 14:02:31
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:PA0952
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:9724
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:26865
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
Homologs By Global Alignment
Gene ID:4862

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
7240 PA0952_tr translation of PA0952 127 99.99 99.99 0 634.0
189089 gb|AAG04341.1|AE004529_7 (AE004529) hypothetical protein PA0952 [Pseudomonas aeruginosa PAO1] 127 99.99 99.99 0 634.0
GC ORFID: 47864How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA0952Glimmer Score:
Start: 341996Stop: 341613
Length: 384
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA0952 translation of PA0952Homolog Bit Score 248.0
Other Homologs: t_PA0952 (ORF: GLIMMER)
GC ORF Sequence
ATGAAAGACCATCTGATCGGAAGCGTCCCCGCACACCTGGTGGATGCCGCACGCCCGACCCTGACAGCCCAC
GAGGGCCTGGTCGCGGACTACAACATTGCCGCCTGGCTACATCTTCCGGATGCCTGCGACCTGCTGGTGTCA
CTGGTGGTCAGCTATCTGGATGGCGGGCGCCAGCGCGAAGTGGCGGTGGATCACGGACGAATCGACCGCCAG
CAACGCATCCTGCTTTCCGGCATTGCCCGCCTGCCCGTACGGCAGAAAGTGGAGAACATGCAGGTACGCCTG
AAGTCGGCGACGGCCTTTTCCCGACTGGTCGTGGAGGAGTTCTTCGTACAAGCGGTGGAGCAGGAAAACAGG
TCACAGCAGGTGTCCGAAGCTTGA