ViewGene
Locus Name:
GeneID:
Location:

GeneID:4824
TrivialName: PA14_51760
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_51760
PAO1 Ortholog Locus:
Sequence Length:747
Protein Length:248
Start: 4597007
Stop: 4597753
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAA83920.1| (M16489) ORF 4; putative [Escherichia coli]
Identities = 58/190 (30%), Positives = 87/190 (45%)
Sequence:
GTGCACCTTGCGGTGCAGGATGGCCTGGAACTCGTCGGCGAAGGTGTAGTAACGACCGATCAGCATCTCAGA
ACGTGCGGAGAAGCGGTTGTAGGCGATGACCGCGGGGATCGCGGCGAACAGGCCGATGGCGGTGGCGATCAG
CGCTTCGGCGATACCCGGGGCGACGGTGGCCAGGGTAGCCTGCTGCACGGTGGCCAGGCCACGGAAGGAATT
CATGATACCCCAGACGGTACCGAACAGGCCGACGTACGGGCTGGTGGAGCCGACGGTTGCCAGGAACGGCAG
GCTGGCCTCGAGTTTCTCCTCCTCACGGGAGATGGCCACACGCATGGCGCGCGCCACGCCCTCCATCACTGC
ATCGGGATCGACGCCGGGCTGCTGGCGCAGACGGGAAAACTCCTTGAAGCCGGCACGGAAGATCTGCTCGAC
GCCGGAGTCCGGGTCCGGATTGCTACCGGCCTGGCGATACAGCTTGGACAGGTCGATGCCCGACCAGAAGCG
TTCTTCGAAGGCATCCAGTGCCTTCTTGGCAGCGCGCATGGCGTTGCCGCGCTGGAAAATCATGATCCAGGA
TGTGACCGAGGCGGCCACGAGGGTCAGCATGACCAGCTGCACCACGATACTGGCGTTGCTGATCAGGCTCCA
CATGGAGGTATGGTCGACGACGTTCGGTTCCACTTTAATCTCCTGCTGAAAAAGAATCCGGGCTTCCGGCAA
AAGCCGCACGCAACGTTTCGGGGATAG
Translation:
MHLAVQDGLELVGEGVVTTDQHLRTCGEAVVGDDRGDRGEQADGGGDQRFGDTRGDGGQGSLLHGGQATEGI
HDTPDGTEQADVRAGGADGCQERQAGLEFLLLTGDGHTHGARHALHHCIGIDAGLLAQTGKLLEAGTEDLLD
AGVRVRIATGLAIQLGQVDARPEAFFEGIQCLLGSAHGVAALENHDPGCDRGGHEGQHDQLHHDTGVADQAP
HGGMVDDVRFHFNLLLKKNPGFRQKPHATFRG*
AnnotationID:4829GeneID:4824
AnnotatorUID: danlee
Modification Date/Time: 2004-05-12 13:01:10
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:






   
Genomic Context:






   
Comment:


















    ReferenceID:15190




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:26789




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 47826How Found: BLASTX

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: psyr_15may02_Scaffold3_revised_gene4754Glimmer Score: 

          
Start: 356900Stop: 356154

          
Length: 747


          
Start Codon: GTGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: psyr_15may02_Scaffold3_revised_gene4754 related to: gi|1128979|gb|AAA83920.1| (M16489) ORF 4; putative [Escherichia coli]Homolog Bit Score 255.0

          
Other Homologs:  

          
GC ORF Sequence

           
GTGCACCTTGCGGTGCAGGATGGCCTGGAACTCGTCGGCGAAGGTGTAGTAACGACCGATCAGCATCTCAGA 
ACGTGCGGAGAAGCGGTTGTAGGCGATGACCGCGGGGATCGCGGCGAACAGGCCGATGGCGGTGGCGATCAG 
CGCTTCGGCGATACCCGGGGCGACGGTGGCCAGGGTAGCCTGCTGCACGGTGGCCAGGCCACGGAAGGAATT 
CATGATACCCCAGACGGTACCGAACAGGCCGACGTACGGGCTGGTGGAGCCGACGGTTGCCAGGAACGGCAG 
GCTGGCCTCGAGTTTCTCCTCCTCACGGGAGATGGCCACACGCATGGCGCGCGCCACGCCCTCCATCACTGC 
ATCGGGATCGACGCCGGGCTGCTGGCGCAGACGGGAAAACTCCTTGAAGCCGGCACGGAAGATCTGCTCGAC 
GCCGGAGTCCGGGTCCGGATTGCTACCGGCCTGGCGATACAGCTTGGACAGGTCGATGCCCGACCAGAAGCG 
TTCTTCGAAGGCATCCAGTGCCTTCTTGGCAGCGCGCATGGCGTTGCCGCGCTGGAAAATCATGATCCAGGA 
TGTGACCGAGGCGGCCACGAGGGTCAGCATGACCAGCTGCACCACGATACTGGCGTTGCTGATCAGGCTCCA 
CATGGAGGTATGGTCGACGACGTTCGGTTCCACTTTAATCTCCTGCTGAAAAAGAATCCGGGCTTCCGGCAA 
AAGCCGCACGCAACGTTTCGGGGATAG