ViewGene
Locus Name:
GeneID:
Location:

GeneID:4758
TrivialName: PA14_68600
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_68600
PAO1 Ortholog Locus:
Sequence Length:1002
Protein Length:333
Start: 6118218
Stop: 6119219
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGTGGTTCCCCGTCGGCCAGAGGCCGAGTCCTCCAAACTTCGTAGCGCTTCAAAAAACTCACTACAGGAAA
AAAGTGGCGGGATTATGCCAGAAAAGCCCGCTGGATGAAAAATCGTCAGTGGCGGGTCTCGGAAGGCCCCTG
GCTGCCAGCGCCAGCGAACAACTGGGCGACGTCGGAGGCGTCGAACAGGTAGCGCTGGTTGCAGAACTGGCA
GTCGATGGTGATCGAGCCTTCTTCCTCCTCGAGCAGCCGCTCGCAGTCGGCCTGCCCGAGACTGACCAGGGC
GTTGGCCGAACGTTCCCGCGAGCAACTGCAATGGAAGACCAGCGGTTGCGGCTCGAACAGGCGCACGGTTTC
CTCGTGGTAGAGGCGGTGCAGGACGGTCTCGTTGTCCAGCGCCAGCAGCTCTTCGGCGGTCAGCGTGTCGGC
CAGGGTGGTCAGGTGCTGCCAACTGGCCTCGCGGGCCTCGGGGTCCTTCAGGCGGTCGGCGGGAAGCTGCTG
CAGCAGCAGGCCGCGGGCGCGGCGGCCGTTGGCGTTGAGCCAGAAACGGGTCGGCAGCTGTTCCGAGCTGGC
GAAGTAGTTGGACAGGCATTCCGCCAGGTTCACCCCCTCCAGGGCGACGATCCCCTGGTAGCGCTGGCCCTT
GACCGGGTCCACGGTGAGGGTCAGCACGCCTTCGGGCATCAGTTCCTGCATGCCGGCGTCGGCGCCGATGGA
CTCCGCCGAATAGCGGGCCAGGCCACGCACCTGGCGGTCGCTGGAACACTCCACCATCAACAGCGGCACCGC
GCCGCTGGAGCGCGCCTGCAATACCAGCAGGCCGTCGAACTTGAGCGTGCCGCAGAGCAGCGAGGCCGCCGC
GAGCATCTCCCCGAGCAGTTGCGCGACCGGTTCCGGATAGGGATGTTTGGCCAGCACTTCGCTGTAGCTACG
CTCGAGATCGACCATCTCGCCGCGCACGTCGGTATCGTCGAAAAGGAAACGCTGGCTCTGATCTGA
Translation:
MWFPVGQRPSPPNFVALQKTHYRKKVAGLCQKSPLDEKSSVAGLGRPLAASASEQLGDVGGVEQVALVAELA
VDGDRAFFLLEQPLAVGLPETDQGVGRTFPRATAMEDQRLRLEQAHGFLVVEAVQDGLVVQRQQLFGGQRVG
QGGQVLPTGLAGLGVLQAVGGKLLQQQAAGAAAVGVEPETGRQLFRAGEVVGQAFRQVHPLQGDDPLVALAL
DRVHGEGQHAFGHQFLHAGVGADGLRRIAGQATHLAVAGTLHHQQRHRAAGARLQYQQAVELERAAEQRGRR
EHLPEQLRDRFRIGMFGQHFAVATLEIDHLAAHVGIVEKETLALI*
AnnotationID:4763GeneID:4758
AnnotatorUID: diggins
Modification Date/Time: 2005-03-15 17:05:25
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:9516




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:26657




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 47760How Found: BLASTX

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: psyr_15may02_Scaffold2_revised_gene310Glimmer Score: 

          
Start: 5381904Stop: 5382905

          
Length: 1002


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: psyr_15may02_Scaffold2_revised_gene3101Homolog Bit Score 266.0

          
Other Homologs:  

          
GC ORF Sequence

           
ATGTGGTTCCCCGTCGGCCAGAGGCCGAGTCCTCCAAACTTCGTAGCGCTTCAAAAAACTCACTACAGGAAA 
AAAGTGGCGGGATTATGCCAGAAAAGCCCGCTGGATGAAAAATCGTCAGTGGCGGGTCTCGGAAGGCCCCTG 
GCTGCCAGCGCCAGCGAACAACTGGGCGACGTCGGAGGCGTCGAACAGGTAGCGCTGGTTGCAGAACTGGCA 
GTCGATGGTGATCGAGCCTTCTTCCTCCTCGAGCAGCCGCTCGCAGTCGGCCTGCCCGAGACTGACCAGGGC 
GTTGGCCGAACGTTCCCGCGAGCAACTGCAATGGAAGACCAGCGGTTGCGGCTCGAACAGGCGCACGGTTTC 
CTCGTGGTAGAGGCGGTGCAGGACGGTCTCGTTGTCCAGCGCCAGCAGCTCTTCGGCGGTCAGCGTGTCGGC 
CAGGGTGGTCAGGTGCTGCCAACTGGCCTCGCGGGCCTCGGGGTCCTTCAGGCGGTCGGCGGGAAGCTGCTG 
CAGCAGCAGGCCGCGGGCGCGGCGGCCGTTGGCGTTGAGCCAGAAACGGGTCGGCAGCTGTTCCGAGCTGGC 
GAAGTAGTTGGACAGGCATTCCGCCAGGTTCACCCCCTCCAGGGCGACGATCCCCTGGTAGCGCTGGCCCTT 
GACCGGGTCCACGGTGAGGGTCAGCACGCCTTCGGGCATCAGTTCCTGCATGCCGGCGTCGGCGCCGATGGA 
CTCCGCCGAATAGCGGGCCAGGCCACGCACCTGGCGGTCGCTGGAACACTCCACCATCAACAGCGGCACCGC 
GCCGCTGGAGCGCGCCTGCAATACCAGCAGGCCGTCGAACTTGAGCGTGCCGCAGAGCAGCGAGGCCGCCGC 
GAGCATCTCCCCGAGCAGTTGCGCGACCGGTTCCGGATAGGGATGTTTGGCCAGCACTTCGCTGTAGCTACG 
CTCGAGATCGACCATCTCGCCGCGCACGTCGGTATCGTCGAAAAGGAAACGCTGGCTCTGATCTGA