ViewGene
Locus Name:
GeneID:
Location:

GeneID:4420
TrivialName: PA14_13250
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_13250
PAO1 Ortholog Locus:PA3916
Sequence Length:453
Protein Length:150
Start: 1139555
Stop: 1140007
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG07303.1|AE004809_3 (AE004809) molybdopterin converting factor, large subunit [Pseudomonas aeruginosa PAO1]
Identities = 150/150 (100%), Positives = 150/150 (100%)
Sequence:
ATGGCCATCCGCGTCCAGCAGGCCGCTTTCGATCCGGGGCAGGAGCTTAACGCCCTGCATGCGCAGAACGTC
GGCATCGGCGCGGTGGTCGGCTTCGTCGGCTACGTGCGCGACTTCAACGACGGTCGCGAGGTCGGCGGGATG
TTCCTCGAACATTATCCGGGCATGACCGAGAAGGCCCTCGGCAAGATCGCCGCCGAGGCCGGGCAGCGCTGG
CCGCTGCTGCGCCTGGAGATTCTCCACCGCATCGGCCGCCTGGAGCCGGGCGAGCCGATCGTCTTCGTCGGT
TGCGCCAGCGCCCACCGGCAGGCGGCGTTCGACGCCTGCAACTTCGTCATGGACTACCTGAAGACCCGCGCG
CCGTTCTGGAAGAAGGAAGACACCGCCGAAGGCCCGCGCTGGGTCGAAGGCCGCTGCAGCGACCAGGCCGCC
GCGCAGCGCTGGGAGGAGTGA
Translation:
MAIRVQQAAFDPGQELNALHAQNVGIGAVVGFVGYVRDFNDGREVGGMFLEHYPGMTEKALGKIAAEAGQRW
PLLRLEILHRIGRLEPGEPIVFVGCASAHRQAAFDACNFVMDYLKTRAPFWKKEDTAEGPRWVEGRCSDQAA
AQRWEE*
AnnotationID:4426GeneID:4420
AnnotatorUID: urbach
Modification Date/Time: 2004-03-16 09:09:41
Gene Name:moaE
Confidence Code:2
GeneProduct:molybdopterin converting factor, large subunit
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(4) Biosynthesis of cofactors, prosthetic groups and carriers
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG0314,pfam02391,KOG3307
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:
56.20% identical to emb|CAA49865.1| (X70420) moaE [Escherichia coli]






 
Structural Features:






   
Genomic Context:






   
Comment:


















    ReferenceID:8841




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:17130




  
Author/Investigator(s):
        Rivers SL, McNairn E, Blasco F, Giordano G, Boxer DH.





  
Title:
        Molecular genetic analysis of the moa operon of Escherichia coli K-12 required for molybdenum cofactor biosynthesis.




  
PubMed:
        8361352


MedLine:
        93368423




    
Source:
Mol Microbiol. 1993 Jun;8(6):1071-81.






    
Reference Type:Journal 







    
Data:


    		




 
URL:http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Retrieve&list_uids=93368423&dopt=Citation

















    ReferenceID:17131




  
Author/Investigator(s):
        





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:Misc (text/plain)







    
Data:4420_CDD.html


    		




 
URL:

















    ReferenceID:25984




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









           
Homologs By Global Alignment 

           

       



     
Gene ID:4420
           
Identity:

                               
                                   0%
                               
                                   10%
                               
                                   20%
                               
                                   30%
                               
                                   40%
                               
                                   50%
                               
                                   60%
                               
                                   70%
                               
                                   80%
                               
                                   90%
                               
                                   100%
                               
                             

                           

     
HomologID
                           Accession
                           Description
                           Length
                           PctIdentity
                           PctSimilarity
                           Gaps
                           Score
     

     
     
6759
                           PA3916_tr
                           translation of PA3916
                           150
                           99.99
                           99.99
                           0
                           804.0
     

     
     
181096
                           gb|AAG07303.1|AE004809_3
                           (AE004809) molybdopterin converting factor, large subunit [Pseudomonas aeruginosa PAO1]
                           150
                           99.99
                           99.99
                           0
                           804.0
     

     
     
181097
                           gb|AAN66918.1|AE016320_6
                           (AE016778) molybdenum cofactor biosynthesis protein E [Pseudomonas putida KT2440]
                           150
                           82.66
                           88.66
                           2
                           679.0
     

     
     
181098
                           gb|AAO54774.1|
                           (AE016860) molybdenum cofactor biosynthesis protein E [Pseudomonas syringae pv. tomato str. DC3000]
                           150
                           81.33
                           90.00
                           2
                           666.0
     

     
     
181100
                           gb|AAO11407.1|AE016807_126
                           (AE016807) Molybdenum cofactor biosynthesis protein E [Vibrio vulnificus CMCP6]
                           152
                           57.89
                           68.42
                           3
                           437.0
     

     






      

          
GC ORFID: 47422How Found: BLASTX

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: t_PA3916Glimmer Score: 

          
Start: 3814383Stop: 3813931

          
Length: 453


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: t_PA3916 translation of PA3916Homolog Bit Score 314.0

          
Other Homologs:  psyr_15may02_Scaffold3_revised_gene4386 (ORF: BLASTX 253.0), t_PA3916 (ORF: GLIMMER)

          
GC ORF Sequence

           
ATGGCCATCCGCGTCCAGCAGGCCGCTTTCGATCCGGGGCAGGAGCTTAACGCCCTGCATGCGCAGAACGTC 
GGCATCGGCGCGGTGGTCGGCTTCGTCGGCTACGTGCGCGACTTCAACGACGGTCGCGAGGTCGGCGGGATG 
TTCCTCGAACATTATCCGGGCATGACCGAGAAGGCCCTCGGCAAGATCGCCGCCGAGGCCGGGCAGCGCTGG 
CCGCTGCTGCGCCTGGAGATTCTCCACCGCATCGGCCGCCTGGAGCCGGGCGAGCCGATCGTCTTCGTCGGT 
TGCGCCAGCGCCCACCGGCAGGCGGCGTTCGACGCCTGCAACTTCGTCATGGACTACCTGAAGACCCGCGCG 
CCGTTCTGGAAGAAGGAAGACACCGCCGAAGGCCCGCGCTGGGTCGAAGGCCGCTGCAGCGACCAGGCCGCC 
GCGCAGCGCTGGGAGGAGTGA