ViewGene
Locus Name:
GeneID:
Location:

GeneID:4371
TrivialName: PA14_55120
AnnotatorUID: danlee
Modification Date/Time:2006-06-28 16:04:41
LocusName:PA14_55120
PAO1 Ortholog Locus:PA0711
Sequence Length:507
Protein Length:168
Start: 4896882
Stop: 4897388
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Replaced by PA14_55117. Homology: gb|AAG04100.1|AE004506_10 (AE004506) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 163/167 (97%), Positives = 164/167 (98%)
Sequence:
ATGAATATTTCCATCCGTGCGGAAACGCCCGGCGACATCGACGCCATCGCTCGCCTGACCGAAGCCGCGCTC
CGCAACGAAACGCATAGCAGCCATACCGAGCAGTACATCGTCGATGCCCTCCGCCGTGCTGGCGCGCTGACG
CTTTCGCTGGTGGCCGAAGCGAATGGCCAGGTGATCGGCCATATCGCAGCCTCACCAGTGACCATCGATGGC
GAAGCGGGCGGCTGGTACGGCCTCGCGCCGCTATCGGTGGCGCCCGGGCGACAGCGCCAGGGTCTCGGTTCG
CAGTTGGTCCGGCGCCTGCTCACCGAGTTGCGACTGCTGCCCGCGGGTGGCTGCGTGGTACTGGGCGAACCG
ACCTACTACTCGCGCTTCGGCTTTCGGGTGGAAAGCGGCCTGGCGTTGCCCGGCGTTCCCGCCGAATACTTC
CAGGCACAGTCCTTCAGCGGGCGCATGGCGCGAGGAATAGTGGCCTTCCACGCCGCATTCGACGCCAGCGAC
TGA
Translation:
MNISIRAETPGDIDAIARLTEAALRNETHSSHTEQYIVDALRRAGALTLSLVAEANGQVIGHIAASPVTIDG
EAGGWYGLAPLSVAPGRQRQGLGSQLVRRLLTELRLLPAGGCVVLGEPTYYSRFGFRVESGLALPGVPAEYF
QAQSFSGRMARGIVAFHAAFDASD*
AnnotationID:4377GeneID:4371
AnnotatorUID: danlee
Modification Date/Time: 2004-03-12 13:01:25
Gene Name:
Confidence Code:3
GeneProduct:putative acetyltransferase
Cell Localization:()
Synonyms:PA0711
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(20) Putative enzymes
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
COG3153, Predicted acetyltransferase [General function prediction only]
     CD-Length = 171 residues,  98.8% aligned
     Score =  141 bits (356), Expect = 1e-34






   
Genomic Context:






   
Comment:


















    ReferenceID:8743




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:25886




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









           
Homologs By Global Alignment 

           

       



     
Gene ID:4371
           
Identity:

                               
                                   0%
                               
                                   10%
                               
                                   20%
                               
                                   30%
                               
                                   40%
                               
                                   50%
                               
                                   60%
                               
                                   70%
                               
                                   80%
                               
                                   90%
                               
                                   100%
                               
                             

                           

     
HomologID
                           Accession
                           Description
                           Length
                           PctIdentity
                           PctSimilarity
                           Gaps
                           Score
     

     
     
6706
                           PA0711_tr
                           translation of PA0711
                           168
                           97.02
                           97.61
                           0
                           821.0
     

     
     
180154
                           gb|AAG04100.1|AE004506_10
                           (AE004506) hypothetical protein PA0711 [Pseudomonas aeruginosa PAO1]
                           168
                           97.02
                           97.61
                           0
                           821.0
     

     
     
180156
                           gb|AAN30458.1|AE014449_5
                           (AE014449) acetyltransferase, GNAT family [Brucella suis 1330]
                           168
                           54.16
                           66.66
                           4
                           437.0
     

     
     
180155
                           gb|AAL51647.1|
                           (AE009489) ACETYLTRANSFERASE [Brucella melitensis 16M]
                           171
                           53.21
                           65.49
                           5
                           434.0
     

     
     
180157
                           gb|AAL42784.1|
                           (AE009134) acetyltransferase [Agrobacterium tumefaciens str. C58 (U. Washington)]
                           169
                           52.07
                           62.72
                           3
                           419.0
     

     






      

          
GC ORFID: 47373How Found: BLASTX

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: t_PA0711Glimmer Score: 

          
Start: 57025Stop: 56519

          
Length: 507


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: t_PA0711 translation of PA0711Homolog Bit Score 321.0

          
Other Homologs:  t_PA0711 (ORF: GLIMMER)

          
GC ORF Sequence

           
ATGAATATTTCCATCCGTGCGGAAACGCCCGGCGACATCGACGCCATCGCTCGCCTGACCGAAGCCGCGCTC 
CGCAACGAAACGCATAGCAGCCATACCGAGCAGTACATCGTCGATGCCCTCCGCCGTGCTGGCGCGCTGACG 
CTTTCGCTGGTGGCCGAAGCGAATGGCCAGGTGATCGGCCATATCGCAGCCTCACCAGTGACCATCGATGGC 
GAAGCGGGCGGCTGGTACGGCCTCGCGCCGCTATCGGTGGCGCCCGGGCGACAGCGCCAGGGTCTCGGTTCG 
CAGTTGGTCCGGCGCCTGCTCACCGAGTTGCGACTGCTGCCCGCGGGTGGCTGCGTGGTACTGGGCGAACCG 
ACCTACTACTCGCGCTTCGGCTTTCGGGTGGAAAGCGGCCTGGCGTTGCCCGGCGTTCCCGCCGAATACTTC 
CAGGCACAGTCCTTCAGCGGGCGCATGGCGCGAGGAATAGTGGCCTTCCACGCCGCATTCGACGCCAGCGAC 
TGA