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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG05985.1|AE004688_7 (AE004688) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 379/383 (98%), Positives = 380/383 (99%)
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Sequence:
ATGGCCGTCCTGCAGACTCCCTCGGCGGCGTTCGACGAATGGCTGCCGGAACTGACCCGGCAACTGGCGGAA
AGCGCCGATGCCCATGACCGCAGCGGAGATTTTCCCCATGCCAACCTGGCCCTGCTGCGACACCACGGGCTG
CTCGCCCTAGCCTTGCCGCCTGCGCTCGGCGGTCCCGGCGCCAGCCTCGGCGAGCTGCGCAGGGTAATCGGC
GCGGTGGCTCGCGGCGAACCCTCCACGGCCCTGGTGCTGTGCATGCAGTACCTGCATTTGCGGCGCCTGGCC
GATAACCCCGATTGGCCCGGCGCGCTCAAGCGGCGCGTGGCGCGCGAGGTGCTGGAGCAGGGGGCGTTGATC
AATAGCCTGCGCGTGGAGCCCGAGCTGGGTTCGCCGTCACGCGGCGGTCTGCCGGGTACGCTGGCGCGGCGT
GTCGGCGACGGCTGGCGGCTGTCCGGGCACAAGCTCTACACCACCGGCATTCCCGGGCTGACCTGGCTGGCG
GTATGGGCGTGCAGCGACGAGCCGATCCCACGCGTGGGTACCTGGCTGGTGCGCCGCGACAGCCCAGGCATC
CGTATCGTGGAGAGCTGGGACCATCTGGGCATGCGCGCCAGCGGCAGCCACGAGGTGCTCTTCGAAGAGGTG
GCGGTGCCTCTGGAAAACGCCATCGGCCTGCATCCCCACGACCAGCCTCCGGCGCCGGACCAGGCCGTGCTG
CGCGACTTCGCCCAGGCTAGCGCGGTGTTGCTTGGCGCTCTCTACGACGGTATCGCCGGGAGCGCCCGCGAG
TGGCTCGTCGGCTGGCTGCGCGAGCGCGTGCCGGCCAGTCTCGGCGCGCCGTTGGCGAGCCTGCCGAGGATG
CAGGAGGCGCTCGGCGAGATCGACGGCCTGCTCCTGCAGAACCGCCTGCTGCTCGATGCCGCGTGCTGCGGA
CAGTTGCCCGCCAGCGACTCCGGGCTGCTCAAGGTCGCGGTCATCGACAACGCGTTGGCAGTGGTCGAGAAG
GCCCTGGAACTGAGCGGCAACCACGGCCTCAGCCGGCACAATCCGCTACAGCGGCACTACCGCGACGTGCTT
TGCGGACGTGTCCACACGCCACAGAAAGATAGCGTCTGGAGCGCGGCGGGGAGGGCGGCACTGAGTCTTTGA
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Translation:
MAVLQTPSAAFDEWLPELTRQLAESADAHDRSGDFPHANLALLRHHGLLALALPPALGGPGASLGELRRVIG
AVARGEPSTALVLCMQYLHLRRLADNPDWPGALKRRVAREVLEQGALINSLRVEPELGSPSRGGLPGTLARR
VGDGWRLSGHKLYTTGIPGLTWLAVWACSDEPIPRVGTWLVRRDSPGIRIVESWDHLGMRASGSHEVLFEEV
AVPLENAIGLHPHDQPPAPDQAVLRDFAQASAVLLGALYDGIAGSAREWLVGWLRERVPASLGAPLASLPRM
QEALGEIDGLLLQNRLLLDAACCGQLPASDSGLLKVAVIDNALAVVEKALELSGNHGLSRHNPLQRHYRDVL
CGRVHTPQKDSVWSAAGRAALSL* |
AnnotationID:1650 | GeneID:1641 |
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Modification Date/Time: |
2005-03-07 10:10:38 |
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GeneProduct: | putative acyl-CoA dehydrogenase |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (20) Putative enzymes |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | energy metabolism |
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Homology: | >gb|AAO55310.1| (AE016862) acyl-CoA dehydrogenase family protein [Pseudomonas
syringae pv. tomato str. DC3000]
Length = 397
Score = 421 bits (1081), Expect = e-117
Identities = 213/381 (55%), Positives = 272/381 (71%), Gaps = 7/381 (1%)
>gb|AAN68833.1|AE016516_3 (AE016786) acyl-CoA dehydrogenase-related protein [Pseudomonas
putida KT2440]
Length = 380
Score = 405 bits (1041), Expect = e-112
Identities = 208/382 (54%), Positives = 264/382 (69%), Gaps = 6/382 (1%)
>dbj|BAC51717.1| (AP005958) acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA
110]
Length = 390
Score = 373 bits (957), Expect = e-102
Identities = 193/371 (52%), Positives = 250/371 (67%), Gaps = 9/371 (2%) |
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Structural Features: | cd00567, ACAD, Acyl-CoA dehydrogenase (ACAD).
CD-Length = 369 residues, 94.3% aligned
Score = 155 bits (392), Expect = 1e-38
cd01163, DszC, Dibenzothiophene (DBT) desulfurization enzyme C (DszC).
CD-Length = 377 residues, 93.6% aligned
Score = 126 bits (318), Expect = 5e-30
cd01158, SCAD/SBCAD, Short chain acyl-CoA dehydrogenase (SCAD).
CD-Length = 373 residues, 89.8% aligned
Score = 123 bits (309), Expect = 5e-29 |
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