ViewGene

Locus Name:
GeneID:
Location:

GeneID:997
TrivialName: PA14_01660
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_01660
PAO1 Ortholog Locus:PA0134
Sequence Length:1371
Protein Length:456
Start: 151223
Stop: 149853
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG03524.1|AE004451_5 (AE004451) probable guanine deaminase [Pseudomonas aeruginosa PAO1]
Identities = 452/456 (99%), Positives = 453/456 (99%)
Sequence:
ATGAACGATGCAGTACCTGCTGGCAACTTCGTCCCCCCACTTGTCCTGCGCTCCGACCACGGCGGGAGCGCG
ATGAGCAGTTCGGCCCATCGCGGGCGGATCCTGCATTTCCTCGGCGACCCGGCGAAGCTCGGCGACAAGGCC
TGGGAGTATTTCGAGGACGGCCTGCTGTGGATCGAACACGGCCACGTGCGCGCGCTCGATCACGCAGCCTAC
CTGCTGCCACAACTGCCCGCCGACCTGCCGCTGGAGGAGCATCCGCAGCGCCTGCTGCTGCCCGGCTTCGTC
GACTGCCATGTGCATTACCCGCAACTCGGAGTGATCGCCTCCTACGGCACCCAACTGCTGGACTGGCTGGAA
ACCCACACCTTTCCCGCCGAGCAGCGCTTCGCCGATGCCGGCTACGCCGCCGCCCAGGCCGAGCTGTTCCTC
GACGAACTGCTGCGCCACGGCACCACTACCGCGCTGGTGTTCGGCACGGTCCATGCGGTATCCGCCGAGGCA
TTCTTCCAGGCCGCGCAGAAGCGCCGCCTGCGGATGATCGCCGGCAAAGTGCTGATGGACCGCAACGCGCCG
CCGGCGCTGTGCGATACCGCGGCCAGCGGCTACGCCGAGAGCCGCGCGCTGATCGAGCGCTGGCACGGCAAC
GGGCGCCTGCAATACGCGGTCACCCCACGCTTCGCGCCGACTTCCTCGCCCGAGCAACTGGCCGCGGCGGCG
CGCCTGCTGGACGAGTATCCCGGCGTCTACCTGCACACCCATCTTTCGGAGAACCTCAAGGAAGTCGCCTGG
GTCGGCGAGCTGTTTCCCCAGGCACAGGACTACCTGGACGTCTATCATCGCGCCGGCCTGGTCGGCGAACGC
AGCGTGTTCGCCCATGGCATCCATCTCTCCGAACGCGAATGCCGCTGCCTGGCGCACAAGAACGCGGCGCTG
GCGCACTGTCCCAGTTCCAACCTGTTCATCGGCTCCGGCCTGTTCGACCTTGGCCGCGCCCAGCAATACGGC
ATCCGCGTCGGCATCGGCAGCGACGTCGGCGGCGGCACCAGCCTGTCGCTGCTGGCCAACCTCGCCGACGCT
TACAAGATCCAGCAATTGCGCGGCACCAGCCTCGATCCGTTCCAGGCGCTCTACCTGGCCACCCTCGGCGGC
GCCAGGGCGCTCGACCTGGACGGCCTGGTCGGTAACTTCCTGCCCGGCCGCGAGGCCGACTTCGTCGCTCTC
GACCTGGCCGCCACGCCGATGATCGCCCAGCGCATGGAGCATGCGCGCGGCCTGGCCGATACCCTGTTCGTG
CTGAACACCCTGGGCGACGACCGCGCGGTGGCGGAGACCTGGGTGATGGGGGAGCGGCGCCATGCGAAGGGC
TGA
Translation:
MNDAVPAGNFVPPLVLRSDHGGSAMSSSAHRGRILHFLGDPAKLGDKAWEYFEDGLLWIEHGHVRALDHAAY
LLPQLPADLPLEEHPQRLLLPGFVDCHVHYPQLGVIASYGTQLLDWLETHTFPAEQRFADAGYAAAQAELFL
DELLRHGTTTALVFGTVHAVSAEAFFQAAQKRRLRMIAGKVLMDRNAPPALCDTAASGYAESRALIERWHGN
GRLQYAVTPRFAPTSSPEQLAAAARLLDEYPGVYLHTHLSENLKEVAWVGELFPQAQDYLDVYHRAGLVGER
SVFAHGIHLSERECRCLAHKNAALAHCPSSNLFIGSGLFDLGRAQQYGIRVGIGSDVGGGTSLSLLANLADA
YKIQQLRGTSLDPFQALYLATLGGARALDLDGLVGNFLPGREADFVALDLAATPMIAQRMEHARGLADTLFV
LNTLGDDRAVAETWVMGERRHAKG*
AnnotationID:1006GeneID:997
AnnotatorUID: diggins
Modification Date/Time: 2004-07-27 19:07:15
Gene Name:
Confidence Code:3
GeneProduct:putative guanine deaminase
Cell Localization:()
Synonyms:guaD
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(18) Nucleotide biosynthesis and metabolism
Alternate Gene Product Name:putative guanine aminohydrolase
Functional Category Confidence Code:5
COGs:COG0402
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
>gb|AAN69861.1|AE016625_4 (AE016790) guanine aminohydrolase [Pseudomonas putida KT2440]
          Length = 434

 Score =  526 bits (1356), Expect = e-149
 Identities = 252/432 (58%), Positives = 329/432 (76%), Gaps = 1/432 (0%)

>gb|AAO57132.1| (AE016869) guanine aminohydrolase [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 437

 Score =  508 bits (1309), Expect = e-143
 Identities = 248/435 (57%), Positives = 321/435 (73%), Gaps = 1/435 (0%)

>gb|AAN81906.1|AE016765_308 (AE016765) Guanine deaminase [Escherichia coli CFT073]
          Length = 479

 Score =  439 bits (1128), Expect = e-122
 Identities = 212/402 (52%), Positives = 286/402 (71%)
Structural Features:
COG0402, SsnA, Cytosine deaminase and related metal-dependent hydrolases 
[Nucleotide transport and metabolism]
Genomic Context:
Comment:
ReferenceID:1997
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:19139
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
ReferenceID:33507
Author/Investigator(s):
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:Misc (text/plain)
Data:997_cdd.html
URL:
Homologs By Global Alignment
Gene ID:997

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
1795 PA0134_tr translation of PA0134 456 99.12 99.34 0 2374.0
62732 gb|AAG03524.1|AE004451_5 (AE004451) probable guanine deaminase [Pseudomonas aeruginosa PAO1] 456 99.12 99.34 0 2374.0
1796 PA1521_tr translation of PA1521 457 55.14 70.89 24 1318.0
62733 gb|AAN69861.1|AE016625_4 (AE016790) guanine aminohydrolase [Pseudomonas putida KT2440] 457 55.14 71.99 24 1357.0
62734 gb|AAG04910.1|AE004580_10 (AE004580) probable guanine deaminase [Pseudomonas aeruginosa PAO1] 457 55.14 70.89 24 1318.0
GC ORFID: 43999How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA0134Glimmer Score:
Start: 5952562Stop: 5951192
Length: 1371
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA0134 translation of PA0134Homolog Bit Score 919.0
Other Homologs: psyr_15may02_Scaffold1_revised_gene585 (ORF: BLASTX 517.0), t_PA1521 (ORF: BLASTX 511.0), t_PA0134 (ORF: GLIMMER)
GC ORF Sequence
ATGAACGATGCAGTACCTGCTGGCAACTTCGTCCCCCCACTTGTCCTGCGCTCCGACCACGGCGGGAGCGCG
ATGAGCAGTTCGGCCCATCGCGGGCGGATCCTGCATTTCCTCGGCGACCCGGCGAAGCTCGGCGACAAGGCC
TGGGAGTATTTCGAGGACGGCCTGCTGTGGATCGAACACGGCCACGTGCGCGCGCTCGATCACGCAGCCTAC
CTGCTGCCACAACTGCCCGCCGACCTGCCGCTGGAGGAGCATCCGCAGCGCCTGCTGCTGCCCGGCTTCGTC
GACTGCCATGTGCATTACCCGCAACTCGGAGTGATCGCCTCCTACGGCACCCAACTGCTGGACTGGCTGGAA
ACCCACACCTTTCCCGCCGAGCAGCGCTTCGCCGATGCCGGCTACGCCGCCGCCCAGGCCGAGCTGTTCCTC
GACGAACTGCTGCGCCACGGCACCACTACCGCGCTGGTGTTCGGCACGGTCCATGCGGTATCCGCCGAGGCA
TTCTTCCAGGCCGCGCAGAAGCGCCGCCTGCGGATGATCGCCGGCAAAGTGCTGATGGACCGCAACGCGCCG
CCGGCGCTGTGCGATACCGCGGCCAGCGGCTACGCCGAGAGCCGCGCGCTGATCGAGCGCTGGCACGGCAAC
GGGCGCCTGCAATACGCGGTCACCCCACGCTTCGCGCCGACTTCCTCGCCCGAGCAACTGGCCGCGGCGGCG
CGCCTGCTGGACGAGTATCCCGGCGTCTACCTGCACACCCATCTTTCGGAGAACCTCAAGGAAGTCGCCTGG
GTCGGCGAGCTGTTTCCCCAGGCACAGGACTACCTGGACGTCTATCATCGCGCCGGCCTGGTCGGCGAACGC
AGCGTGTTCGCCCATGGCATCCATCTCTCCGAACGCGAATGCCGCTGCCTGGCGCACAAGAACGCGGCGCTG
GCGCACTGTCCCAGTTCCAACCTGTTCATCGGCTCCGGCCTGTTCGACCTTGGCCGCGCCCAGCAATACGGC
ATCCGCGTCGGCATCGGCAGCGACGTCGGCGGCGGCACCAGCCTGTCGCTGCTGGCCAACCTCGCCGACGCT
TACAAGATCCAGCAATTGCGCGGCACCAGCCTCGATCCGTTCCAGGCGCTCTACCTGGCCACCCTCGGCGGC
GCCAGGGCGCTCGACCTGGACGGCCTGGTCGGTAACTTCCTGCCCGGCCGCGAGGCCGACTTCGTCGCTCTC
GACCTGGCCGCCACGCCGATGATCGCCCAGCGCATGGAGCATGCGCGCGGCCTGGCCGATACCCTGTTCGTG
CTGAACACCCTGGGCGACGACCGCGCGGTGGCGGAGACCTGGGTGATGGGGGAGCGGCGCCATGCGAAGGGC
TGA