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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG07862.1|AE004861_3 (AE004861) conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 479/480 (99%), Positives = 479/480 (99%)
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Sequence:
ATGAGCGAGTTGTTGTCATCCGTCAGCCAGCAATTGCTGGCCCCCGGTGGTCTGGAACTGGACAGCCTGCCC
GGCATTCTTCATGAACTGAACGGCCCGGGCATCGATGCCGCCGACCTGTATTTCCAGAGCCAGGTCTCCGAG
TCGTGGATGCTCGAGGACGGCATCGTCAAGGAAGGCAGCTTCAATCTCGACCAGGGTGTCGGGGTACGCGCG
CAGTCGGGCGAGAAGACCGGCTTCGCCTATAGCAATGCGATCACCGCCGAGGCGTTGAAACAGGCCGCGGTG
GCGGCCCGTTCGATTTCCCGTGCGGGACAGAACGGCAGCGTGCAGGCGTTCAAGGCCGTGGCGCCGGCTCGC
CTGTACGCCGGCGAGAACCCGCTGGACGTGCTCAGCCGCGCCGAGAAGGTCGAGTTGCTGAAGCAGATCGAC
GCCGCTACCCGTGCGCTCGATCCCCGCATCCAGCAGGTCACGGTGAGCATGGCCGGCGTCTGGGAGCAGATC
CTGGTAGCGGCCAGCGACGGTTCGCTGGCCGCCGACATTCGTCCGCTGGTGCGTTTCAACGTCAGCGTGATC
GTCGAACAGAACGGCCGACGCGAACGCGGCGGCCACGGCGGCGGCGGTCGCACCGACTATCGCTATTTCCTC
CAGGAGGATCGCGCCATGGGCTACGCCCGCGAGGCCCTGCGCCAGGCGCTGGTCAACCTCGAGGCGATCCCC
GCGCCGGCCGGCACCCTGCCGGTGGTGATGGGCGCGGGTTGGTCCGGGGTCCTGCTCCACGAAGCGGTCGGC
CACGGCCTGGAGGGCGACTTCAACCGCAAGGGCAGCTCCGCCTACAGCGGCCGGGTCGGCGAAAAGGTCGCC
TCGAGCCTGTGCACCATCGTCGACGACGGCACCCTGGCCGGGCGTCGCGGCTCGCTGAGCGTGGATGACGAA
GGCACGCCGAGCAACTGCAACGTGCTGATCGAGAACGGCGTGCTCAAGGGCTACATGCAGGACAAGCTCAAC
GCCCGCCTGATGGGCGTGGCGCGCACCGGTAACGGCCGCCGCGAGTCCTACGCGCACCTGCCGATGCCACGC
ATGACCAACACCTACATGCTGGCCGGCGAGAGCGATCCGCAGGAAATCATCGCCTCGGTGGAGAAGGGTATC
TACTGCGCCAACCTCGGCGGTGGCCAGGTCGATATCACCAGCGGCAAGTTCGTGTTCTCCACCAGCGAGGCC
TACCTGATCGAGAACGGCAGGATCACCACCCCGGTGAAAGGCGCCACCCTGATCGGCAACGGTCCGGAAGCG
ATGAGCCGGGTGTCCATGGTCGGCAACGACCTGGCCCTGGACAGTGGCGTGGGAACCTGCGGGAAGGACGGT
CAGTCGGTGCCGGTCGGCGTCGGCCAGCCGACCCTGAAGATCGATGCGATCACCGTCGGCGGCACCGGCGCC
TGA |
Translation:
MSELLSSVSQQLLAPGGLELDSLPGILHELNGPGIDAADLYFQSQVSESWMLEDGIVKEGSFNLDQGVGVRA
QSGEKTGFAYSNAITAEALKQAAVAARSISRAGQNGSVQAFKAVAPARLYAGENPLDVLSRAEKVELLKQID
AATRALDPRIQQVTVSMAGVWEQILVAASDGSLAADIRPLVRFNVSVIVEQNGRRERGGHGGGGRTDYRYFL
QEDRAMGYAREALRQALVNLEAIPAPAGTLPVVMGAGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRVGEKVA
SSLCTIVDDGTLAGRRGSLSVDDEGTPSNCNVLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPR
MTNTYMLAGESDPQEIIASVEKGIYCANLGGGQVDITSGKFVFSTSEAYLIENGRITTPVKGATLIGNGPEA
MSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTGA* |
AnnotationID:936 | GeneID:927 |
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Modification Date/Time: |
2005-05-03 09:09:34 |
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GeneProduct: | putative tldD protein |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (11) DNA replication, recombination, modification and repair |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAN66565.1|AE016285_3 (AE016777) tldD protein [Pseudomonas putida KT2440]
Length = 479
Score = 835 bits (2156), Expect = 0.0
Identities = 421/480 (87%), Positives = 451/480 (93%), Gaps = 1/480 (0%)
>gb|AAO57914.1| (AE016872) tldD protein [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 479
Score = 834 bits (2155), Expect = 0.0
Identities = 421/475 (88%), Positives = 447/475 (94%)
>emb|CAC93142.1| (AJ414158) putative modulator of DNA gyrase [Yersinia pestis CO92]
Length = 481
Score = 637 bits (1642), Expect = 0.0
Identities = 324/478 (67%), Positives = 382/478 (79%), Gaps = 4/478 (0%) |
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Structural Features: | COG0312, TldD, Predicted Zn-dependent proteases and their
inactivated homologs
CD-Length = 454 residues, 98.5% aligned
Score = 423 bits (1088), Expect = 5e-119
Identities = 201/458 (43%), Positives = 266/458 (58%), Gaps = 16/458 (3%)
pfam01523, PmbA_TldD, Putative modulator of DNA gyrase.
CD-Length = 297 residues, 100.0% aligned
Score = 244 bits (624), Expect = 3e-65
Identities = 112/297 (37%), Positives = 158/297 (53%), Gaps = 2/297 (0%) |
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