Modification Date/Time: 2006-04-06 13:01:23
Missense Discrepancy: FALSE
Comments:Homology: gb|AAG04637.1| AE004554_5 (AE004554) Alkaline protease secretion outer membrane protein AprF precursor [Pseudomonas aeruginosa PAO1]
Identities = 481/481 (100%), Positives = 481/481 (100%)
Sequence:
ATGACCATGCGCCGCCTGATGACCTGGCTGTTCGGCGCctTcCTGTTGCTGCTGCGCGAGGATGCCTTCGCC
CTCGGCCTGCTGGACGGCTATCACCTGGCCCTGGAGAACGACCCGCAGTTCCAGGCCGCGATCCAGGAGCAC
GAGgCCGGCAGGCAATACCGTGCGCTCGGCCGCGCGGCGCTGCTGCCGCGCCTGGTGTACAGCTACAACCGT
GGGCGCAGTTGGTCCGATGTGACCCAGACCACCACCCGCGGCGATTTCAAGGAAGACCGCGACTACGACAGC
TACGTCTCCACCCTCAGCCTGCAACAGCCGTTGTTCGACTACGAGGCCTTCAGCCGCTACCGCAAGGGCGTG
GCCcAGGCGCTGCTGTCCGACGAGCGCTTCCGCAGCCAGAGCCAGGAACTGCTGGTCCGGGTCCTGGAAGCC
TATACCGGCGCGCTGCTGGCCCAGGACCAGATCGAACTGGCGCGGGCGCAGAAACGCTCCTACCGCGAGCAG
TTCCAGCTCAACCAGCGCCAGTTCGAGCGCGGCAACGGCACCCGCACCGACACCCTGGAGACCCAGGCCCGC
TTCAACCTGGCCCAGGCCCAGGAAATCGAGGCGCGGGACAGCCAGGATGCCGCCCTGCGCGAGCTGGAGCGA
CTGGTCGGGGCGCCGCTGGAGATCGCCGACCTGGCGCCGCTCGGCGAACGCTTCCAGGTGCGCCCGCTGAGC
CCCGCCAGCTACACCGCCTGGCGCGACCTGGCGCTGGCCGAGAATCCCGAGCTGGCCTCGCTGCGCCACGCG
GTGGACGTGGCCCGCTACGAGGTCGAGCAGAACCGCGCCGACTTCCTGCCGCGCCTGGGCCTGTACGCCAGC
ACCGGCAAGTCCAAGTCCGGTTCGGAGAACACCTACAACCAGCGCTACGAGACCGACAGCGTCGGCATCCAG
TTGAGCGTTCCGCTGTTCTCCGGCGGCGAGACCCTGGCGGCGACGCGCCAGGCCACGCATCGCATGGAGAAG
AGCCATTACGACCTGGACGACAAGGTCCGCGAGACCCTCAACCAGGTGCGCAAGATGTACAACCAGAGCAGC
AGCAGCGCGGCGAAGATCCGCGCCTACGAGATGACCGTGGATTCGGCGCGGACGTTGGTGATGGCCACGCGC
AAGAGCATCGCCGCCGGGGTGCGGGTCAACCTCGACCTGCTGAACGCCGAGCAGGCGCTGTACAGCGCGATG
AACGAGCTGTCCAAGGCCAAGTACGACTACCTCACGGCCTGGGCACGCCTGCGTTTCTACGCCGGGGTGCTG
GACGAGGCCGACCTGGAACTGGTGGCGGCGAACTTCGTTTCCGGCGAGACGCCGGCGCGCCGCCGCGACTGC
GCGACGACGGATTGCCCGGCGCCGCTGCACACCCTGTCGAAGACCGATACGGAGGAAAACCGGAGCGCGCTC
AATTGA
Translation:
MTMRRLMTWLFGAFLLLLREDAFALGLLDGYHLALENDPQFQAAIQEHEAGRQYRALGRAALLPRLVYSYNR
GRSWSDVTQTTTRGDFKEDRDYDSYVSTLSLQQPLFDYEAFSRYRKGVAQALLSDERFRSQSQELLVRVLEA
YTGALLAQDQIELARAQKRSYREQFQLNQRQFERGNGTRTDTLETQARFNLAQAQEIEARDSQDAALRELER
LVGAPLEIADLAPLGERFQVRPLSPASYTAWRDLALAENPELASLRHAVDVARYEVEQNRADFLPRLGLYAS
TGKSKSGSENTYNQRYETDSVGIQLSVPLFSGGETLAATRQATHRMEKSHYDLDDKVRETLNQVRKMYNQSS
SSAAKIRAYEMTVDSARTLVMATRKSIAAGVRVNLDLLNAEQALYSAMNELSKAKYDYLTAWARLRFYAGVL
DEADLELVAANFVSGETPARRRDCATTDCPAPLHTLSKTDTEENRSALN*
AnnotationID:931 GeneID:922
Modification Date/Time:
2006-02-03 13:01:34
GeneProduct: alkaline protease secretion outer membrane protein AprF precursor
Cell Localization: (6) Outer membrane protein
Cell Localization Confidence Code: 1
Functional Category: (19) Protein secretion/export apparatus
Alternate Gene Product Name:
Functional Category Confidence Code: 5
Secondary Functional Category(ies): secreted factors (toxins, enzymes,alginate)
Structural Features: COG1538 , TolC, Outer membrane protein
[Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]
CD-Length = 457 residues, 89.1% aligned
Score = 187 bits (475), Expect = 3e-48
Identities = 120/414 (28%), Positives = 182/414 (43%), Gaps = 9/414 (2%)
pfam02321 , OEP, Outer membrane efflux protein.
CD-Length = 188 residues, 100.0% aligned
Score = 120 bits (302), Expect = 3e-28
Identities = 66/188 (35%), Positives = 101/188 (53%), Gaps = 1/188 (0%)
Genomic Context: Cluster of genes including P.aeruginosa genes aprD, aprE, aprF, aprA, aprI for alkaline protease
secretion apparatus, alkaline protease, inhibitor