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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG08478.1|AE004922_3 (AE004922) probable histidine/phenylalanine ammonia-lyase [Pseudomonas aeruginosa PAO1]
Identities = 510/510 (100%), Positives = 510/510 (100%)
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Sequence:
ATGAGCGACCTACCGAGCGTCGTGTTCGGCGACGGTCCGCTGCGTTGGCAGGAACTGGTCGCGGTGGCCCGG
CACGGTGCGCGCCTGGAACTGTCGGCGGCGGCCTGGGCACGGATCGACAACGCCCGCGCCATCGTCTGCCGT
ATCGTCGCCAATGGCGAGCGTGCCTACGGCATCAGTACCGGCCTCGGCGCGCTGTGCGACGTCCTGCTGGAA
GGCGAGCAGCTCGCCGAGCTGTCGCGCAACACCTTGCTCAGCCATGCCTGCGGGGTCGGCGAGCCGCTGCGC
GACGAACAGACCCGGGCGATCATCTGTGCCGCCGTCGCCAACTACAGCCAGGGTAAGTCCGGGCTCGACCGT
TCGCTGGTGGAAGGGCTGCTGGCGCTGCTCAACCACGGGATTACCCCGCAGGTGCCGGCCCAGGGCTCGGTG
GGCTACCTGACCCACATGGCGCACGTCGGCATCGCCCTGCTCGGCATCGGCGAGGTCAGCTACCGCGGCAGC
GTCGTGCCGGCCGCCGCCGCGTTGGCGGCGGAAGGCCTGGCGACGGTGCGCCTGGGAGCCAAGGACGGGCTC
TGCCTGGTCAACGGCACGCCGTGCATGACCGGCCTCGCCTGCCTGGCCCTGGACGACGCGCAGCGCCTGGCG
CAGTGGGCCGACGTGATCGGGGCGATGAGCTTCGAGGCCCTGCGCGGCCAACTGGCGGCGTTCGACGCCGAG
ATCGTTGCGCTCAAGCCGCATCCCGGGATGCAGCGGGTCGCCGCCAATCTGCGGGCCTTGCTGGCTGGCAGC
CAGGTGCTGGAGAACGCCCGCGGCATCCGCACCCAGGATGCCCTGAGCATCCGCTCGATACCGCAGATCCAT
GGCGCCTGCCGTGACCAGTTGGCCCACGCGGCGCGGCAGATAGAGACCGAACTCAACTCGGCCACCGACAAC
CCGCTGCTGCTGGGTACGCCGGAGGCCTACCGGGTGGTATCCCAGGCCAATCCCCACGGCGAATCGGTGGCG
ATGGCCGCCGACCTGCTGGCGATCGCCGTGGCCGAGCTGGGCGGGGTCGCCGAGCGGCGCCTGGATCGCCTG
GTCAACCCGCTGGTCAGCGGCCTGCCGGCGTTCCTGGTGGGCAAGCCGGGAGTCAACTCGGGGATGATGATC
ACCCAGTACGTCGCCGCCTCCCTGGCCGGCGAGAATCGCCAGCTGGCGCAGCCGGCGGTGGTCGACAACTTC
GTCACCTCGGCGCTCCAGGAGGACCACCTGAGCCTCGGCACCAGTGCCGCGCTCAAGCTTGGCAGGGCCCTG
GAGAACCTCCGGCGGATCCTCGCCATCGAGTACCTGCTGGCCGCCCAGGCCTTCGAATTCCTCGCCCCGCAA
CGCTTCGGCCAGGGCACCGCGGCGGCCTGGGGCATCCTGCGCGAGCGCGTGCCCGCGTACGACACCGACCGC
TGGCTGGCTCCTGACATCGCCAGCGCGGCGGCCATCCTCGGCGAGCGGAAGAGTCTCGCCCGGCTGGCCGCG
AGCATAGGAGACCTGCAATGA |
Translation:
MSDLPSVVFGDGPLRWQELVAVARHGARLELSAAAWARIDNARAIVCRIVANGERAYGISTGLGALCDVLLE
GEQLAELSRNTLLSHACGVGEPLRDEQTRAIICAAVANYSQGKSGLDRSLVEGLLALLNHGITPQVPAQGSV
GYLTHMAHVGIALLGIGEVSYRGSVVPAAAALAAEGLATVRLGAKDGLCLVNGTPCMTGLACLALDDAQRLA
QWADVIGAMSFEALRGQLAAFDAEIVALKPHPGMQRVAANLRALLAGSQVLENARGIRTQDALSIRSIPQIH
GACRDQLAHAARQIETELNSATDNPLLLGTPEAYRVVSQANPHGESVAMAADLLAIAVAELGGVAERRLDRL
VNPLVSGLPAFLVGKPGVNSGMMITQYVAASLAGENRQLAQPAVVDNFVTSALQEDHLSLGTSAALKLGRAL
ENLRRILAIEYLLAAQAFEFLAPQRFGQGTAAAWGILRERVPAYDTDRWLAPDIASAAAILGERKSLARLAA
SIGDLQ* |
AnnotationID:807 | GeneID:798 |
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Modification Date/Time: |
2006-02-03 17:05:16 |
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GeneProduct: | probable histidine/phenylalanine ammonia-lyase |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (8) Central intermediary metabolism |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | amino acid biosynthesis and metabolims |
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Homology: | >gb|AAO58700.1| (AE016875) histidine ammonia-lyase [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 513
Score = 770 bits (1989), Expect = 0.0
Identities = 388/502 (77%), Positives = 442/502 (88%)
>emb|CAC47282.1| (AL591791) PUTATIVE HISTIDINE AMMONIA-LYASE PROTEIN [Sinorhizobium
meliloti]
Length = 499
Score = 443 bits (1139), Expect = e-123
Identities = 249/477 (52%), Positives = 313/477 (65%), Gaps = 4/477 (0%)
>dbj|BAB47798.1| (AP002994) histidine ammonia-lyase [Mesorhizobium loti]
Length = 500
Score = 396 bits (1017), Expect = e-109
Identities = 218/481 (45%), Positives = 302/481 (62%), Gaps = 2/481 (0%)
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Structural Features: | cd01441, HAL, Histidine ammonia-lyase (HAL) catalyzes the first step in the
degradation of histidine to glutamate.
CD-Length = 486 residues, 100.0% aligned
Score = 592 bits (1528), Expect = 3e-170
pfam00221, PAL, Phenylalanine and histidine ammonia-lyase.
CD-Length = 487 residues, 99.8% aligned
Score = 376 bits (967), Expect = 3e-105
Identities = 197/488 (40%), Positives = 277/488 (56%), Gaps = 18/488 (3%)
cd00332, PAL-HAL, Histidine ammonia-lyase (HAL) and phenylalanine
ammonia-lyase (PAL).
CD-Length = 508 residues, 99.0% aligned
Score = 292 bits (749), Expect = 6e-80
cd01442, PAL, Phenylalanine ammonia-lyase (PAL)
CD-Length = 510 residues, 90.8% aligned
Score = 240 bits (614), Expect = 3e-64 |
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