|
|
|
Modification Date/Time: | 2006-04-06 13:01:23 |
|
|
|
|
|
|
|
|
|
|
|
|
Missense Discrepancy: | FALSE |
|
Comments: Homology: gb|AAG07950.1|AE004870_1 (AE004870) conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 512/512 (100%), Positives = 512/512 (100%)
|
Sequence:
ATGAATCTTCTCAAATCATTGGCGGCGGTGAGTTCCATCACCATGCTGTCGCGGGTCCTCGGCTTCGTCCGC
GATACCATCCTGGCGCGGATCTTCGGTGCCGGCCTCGCCACCGACGCCTTTTTCGTCGCCTTCAAGCTGCCC
AACCTGTTGCGGCGGATCTTCGCCGAGGGGGCGTTTTCCCAGGCTTTCGTGCCGATCCTGGCAGAGTACAAG
AACCAGCAGGGCGAGGAGGCGACGCGGACCTTCATCGCCTACGTTTCCGGCTTGCTCACGCTGGTGCTGGCG
CTGGTCACGGCGCTCGGCATCCTCGCCGCGCCCTGGGTTATCTGGGTCACCGCGCCGGGCTTCGCCGATACC
CCGGAAAAGTTCGCCCTGACCACCGACCTGCTGCGGGTGACCTTTCCTTATATATTGCTGATCTCGCTGTCG
TCCCTGGCCGGCGCGATCCTCAACACCTGGAACCGCTTCTCGGTGCCGGCCTTCGTGCCGACCCTGCTGAAC
GTCGCAATGATCGGCTTCGCGCTGTTCCTCACGCCTTATTTCGATCCGCCGGTCATGGTGCTGGGCTGGGCG
GTGCTGGCCGGCGGCCTGTTGCAGCTCCTCTATCAGCTGCCGCACCTGAGGAAGATCGGCATGCTCGTGCTG
CCGCGCCTGAACCTCAGGGACAGCGGCGTCTGGCGGGTGATGAAGCTGATGCTGCCGGCCATCCTGGGGGTC
TCGGTGAGCCAGATCTCGCTGATCATCAACACCATCTTCGCTTCGTTCCTGGCAGCCGGTTCGGTTTCCTGG
ATGTACTACGCCGACCGCCTGATGGAGCTGCCTTCCGGCGTATTGGGCGTGGCGCTGGGGACGATCCTCCTG
CCGATGCTGGCGAAGACCTATTCGAACAAGGATCGCCATGAGTACTCGCGCCTGCTCGACTGGGGCCTGCGC
CTGTGCTTCCTGCTGGTGCTGCCGTGTTCGCTGGCCCTGGCGATCCTCGCCGAACCTCTGACCGTCTCGCTG
TTCCAGTACGGCAAGTTCACCACGGTGGACGCGGCGATGACCCAGCGCGCGCTGGTCGCCTACTCCGTCGGC
CTGCTCGGCATCATCCTGGTCAAGGTTCTTGCGCCGGGCTTCTATGCCCAGCAGAACATCCGTACGCCAGTG
AAGATCGCGCTCTTCACCCTGGTTTCCACCCAGCTGATGAACCTGGCCTTCATCGGCCCGCTTCAGCATGCC
GGCCTGGCCCTGTCCATCGGCCTGGCGGCCTGCCTGAATGCCGGGCTGCTCTACTGGCAACTGCGCAAGCAG
CGTCTGTACCTGCCGCAACCGGGCTGGGCGAAGTTCCTGGTCAAGCTGGTGGTCGCGGTGCTGGCGATGTCG
GCGGTGCTGCTGGCCACGATGCACTGGCTGCCGGCCTGGGAGCAGGGCGCCATGCTGGAGCGATTCCTGCGC
CTCGGCCTGCTGGTGGTTGCCGGTCTCCTGGCCTATTTCGGTATGCTCGCGCTGCTGGGTTTCCGCCTGCGC
GACTTTTCCCGTCGGGCGGTGCTGTGA |
Translation:
MNLLKSLAAVSSITMLSRVLGFVRDTILARIFGAGLATDAFFVAFKLPNLLRRIFAEGAFSQAFVPILAEYK
NQQGEEATRTFIAYVSGLLTLVLALVTALGILAAPWVIWVTAPGFADTPEKFALTTDLLRVTFPYILLISLS
SLAGAILNTWNRFSVPAFVPTLLNVAMIGFALFLTPYFDPPVMVLGWAVLAGGLLQLLYQLPHLRKIGMLVL
PRLNLRDSGVWRVMKLMLPAILGVSVSQISLIINTIFASFLAAGSVSWMYYADRLMELPSGVLGVALGTILL
PMLAKTYSNKDRHEYSRLLDWGLRLCFLLVLPCSLALAILAEPLTVSLFQYGKFTTVDAAMTQRALVAYSVG
LLGIILVKVLAPGFYAQQNIRTPVKIALFTLVSTQLMNLAFIGPLQHAGLALSIGLAACLNAGLLYWQLRKQ
RLYLPQPGWAKFLVKLVVAVLAMSAVLLATMHWLPAWEQGAMLERFLRLGLLVVAGLLAYFGMLALLGFRLR
DFSRRAVL* |
AnnotationID:796 | GeneID:787 |
|
Modification Date/Time: |
2005-05-05 07:07:00 |
|
|
|
GeneProduct: | putative virulence factor, membrane protein |
|
|
|
Cell Localization Confidence Code: | 5 |
|
|
Functional Category: | (15) Membrane proteins |
|
Alternate Gene Product Name: | |
|
Functional Category Confidence Code: | 5 |
|
|
Secondary Functional Category(ies): | |
|
|
|
|
Homology: | >gb|AAN66227.1|AE016251_3 (AE016776) membrane protein, MviN family [Pseudomonas putida
KT2440]
Length = 512
Score = 858 bits (2216), Expect = 0.0
Identities = 432/511 (84%), Positives = 471/511 (92%)
>gb|AAM85829.1|AE013830_1 (AE013830) putative virulence factor [Yersinia pestis KIM]
Length = 511
Score = 790 bits (2039), Expect = 0.0
Identities = 393/509 (77%), Positives = 451/509 (88%)
>gb|AAN79809.1|AE016759_83 (AE016759) Virulence factor mviN homolog [Escherichia coli CFT073]
Length = 511
Score = 778 bits (2010), Expect = 0.0
Identities = 385/511 (75%), Positives = 451/511 (88%) |
|
Structural Features: | COG0728, MviN, Uncharacterized membrane protein, putative virulence factor
CD-Length = 518 residues, 98.8% aligned
Score = 457 bits (1177), Expect = 3e-129
Identities = 301/514 (58%), Positives = 372/514 (72%), Gaps = 6/514 (1%)
pfam03023, MVIN, MviN-like protein.
CD-Length = 454 residues, 99.3% aligned
Score = 367 bits (943), Expect = 4e-102
Identities = 218/454 (48%), Positives = 293/454 (64%), Gaps = 5/454 (1%) |
|
|
|
|
|