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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG08075.1|AE004882_6 (AE004882) iron (III)-transport system permease HitB [Pseudomonas aeruginosa PAO1]
Identities = 511/512 (99%), Positives = 511/512 (99%) to PA4688 of PAO1.
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Sequence:
GTGCGCCTGCGCACGGGCTCGCGCCGGCGAACGCCATTCTGGCTGTTCCTGCCGGTCCTGCTCCTCGCCCTG
CTGGCCAGCCTGCCGCTGCTCTACGTCGCGGCCAAGGCCTGGGACGCCGGCTGGCACAGCGCCTGGCAACTG
CTCTGGCGCCCCTACGTATTCCGCTTGCTGGGCAACACCCTGTGGCTGATGTTCGGCGTGACCCTGCTCAGC
GCCCTGCTCGGCCTGGCCCTGGCCTGGTGCGTCGAGCGCAGCGACCTGCCGGCACggcGCTTCTGGAACGTG
GTGCTGTGCCTGCCGTTCGCCATCCCCGCCTTCGTCAGCAGTTTCACCTGGGTTTCGCTGAGCCCGATGTAC
GAAGGCCTCGGCGGCGCCATCCTGGTCATGACCATGTCCAAGTATCCGCTGGTCTACCTGCCGGTAGCGGCG
ACCCTGCGCGGCATCGATCCTTCCCTGGAGGAGTCGGCGCGGATGCTCGGTCTGTCGCGGCGCCAGGTGTTC
CTGCGGGTCACCCTGCCGCTGCTGCGCCCGACCCTGGCCGCCACCGGGCTACTGGTGGCGCTGCACATGCTG
GTGGAGTTCGGCGCGCTGTCGATCCTGCGCTACCAGACCTTCACCACAGCCATCTACCAGGAGTTCGAACTG
GAGTTCAGCAACGCCACCGCGGCGATGCTTTCCTCGGTACTCCTGGCACTGTGCTTCCTGCTGCTCTGGCTG
GAGTTGCGCATGCGCGGCCGCGGCCGCCTGGTACGCACCGGCCAGGGCAGCGCGCGGCGGGCCGAACGGGTC
CGCCTGGGGCTTGGCAAGTGGCCGCTCCAGGCGCTGCTGGCGACGCTGGTGCTGGTCGGTACCGGTATCCCC
CTGGTGATGCTCGGTTATTGGCTGTACGAAGGCTCCTCGGCCAGCTTCCCGCTGATGGAAATCGCCTCGACC
CTGCTTTCCTCCCTGTCGCTGGCCTTCGGCGGGGCCCTGCTCAGTTGCCTGCTGGCGCTGCCGGTAAGCATC
CTGGTGGTGCGCTACCCCGGCGCCCTGGCGCGCTGGACCCAGCGCCTGCCGTACCTGCTGCAAGCGTTGCCG
GGACTGGTGATCGCCCTCTCGCTGGTGTACTTCTCGCTGCACTACCTGCCAGCCACCTACCAGACCACCGGC
TTGCTGCTGGTCGCCTATGCCCTGCTGTTCATGCCGCTGACCCAGGCACCGATCCGCGTGGCCCTGGAAAAG
GCCTCGCCGCAGTTGGAGGAAGCCGCCCGCACTCTCGGCCAGACGCCCTTGATGGCCTTCCTGCGGATCACC
CTGCCGATCATCTCGCCGGCCATCGGCGCCGGATTCGTGCTGGTGTTCCTCGACACCATGAAGGAACTGACC
GCCACCCTGGTGCTAGGTCCCACCGGGCTGTCGACCCTGGCCACCTCGGTCTGGGTGCACACCGCCAACCTG
GAGTACGCTGCCGCCGCACCCTACGCCGCGCTGCTGATCCTGATCTCCGGCTTGCCGGTGTACCTGCTGACC
ACCCGGGCGCATCTCAGCACTCACTGA |
Translation:
MRLRTGSRRRTPFWLFLPVLLLALLASLPLLYVAAKAWDAGWHSAWQLLWRPYVFRLLGNTLWLMFGVTLLS
ALLGLALAWCVERSDLPARRFWNVVLCLPFAIPAFVSSFTWVSLSPMYEGLGGAILVMTMSKYPLVYLPVAA
TLRGIDPSLEESARMLGLSRRQVFLRVTLPLLRPTLAATGLLVALHMLVEFGALSILRYQTFTTAIYQEFEL
EFSNATAAMLSSVLLALCFLLLWLELRMRGRGRLVRTGQGSARRAERVRLGLGKWPLQALLATLVLVGTGIP
LVMLGYWLYEGSSASFPLMEIASTLLSSLSLAFGGALLSCLLALPVSILVVRYPGALARWTQRLPYLLQALP
GLVIALSLVYFSLHYLPATYQTTGLLLVAYALLFMPLTQAPIRVALEKASPQLEEAARTLGQTPLMAFLRIT
LPIISPAIGAGFVLVFLDTMKELTATLVLGPTGLSTLATSVWVHTANLEYAAAAPYAALLILISGLPVYLLT
TRAHLSTH* |
AnnotationID:789 | GeneID:780 |
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Modification Date/Time: |
2006-01-15 13:01:44 |
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GeneProduct: | putative iron ABC transporter, permease protein |
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Cell Localization: | (4) Inner membrane protein |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (27) Transport of small molecules |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | membrane protein |
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Homology: | >gb|AAN70450.1|AE016686_4 (AE016792) iron ABC transporter, permease protein [Pseudomonas
putida KT2440]
Length = 521
Score = 664 bits (1714), Expect = 0.0
Identities = 340/504 (67%), Positives = 401/504 (79%)
>emb|CAB84124.1| (AL162754) putative iron-uptake permease inner membrane protein
[Neisseria meningitidis Z2491]
Length = 509
Score = 429 bits (1103), Expect = e-119
Identities = 228/500 (45%), Positives = 332/500 (66%), Gaps = 1/500 (0%)
>gb|AAB32111.1| (S72674) HitB [Haemophilus influenzae]
Length = 506
Score = 429 bits (1103), Expect = e-119
Identities = 229/498 (45%), Positives = 326/498 (65%), Gaps = 3/498 (0%) |
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Structural Features: | COG1178, ThiP, ABC-type Fe3+ transport system, permease component
[Inorganic ion transport and metabolism].
CD-Length = 540 residues, 98.0% aligned
Score = 286 bits (734), Expect = 3e-78
Identities = 206/531 (38%), Positives = 276/531 (51%), Gaps = 32/531 (6%) |
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