ViewGene

Locus Name:
GeneID:
Location:

GeneID:776
TrivialName: PA14_63700
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_63700
PAO1 Ortholog Locus:PA4818
Sequence Length:1437
Protein Length:478
Start: 5679949
Stop: 5678513
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG08203.1|AE004895_3 (AE004895) conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 477/478 (99%), Positives = 477/478 (99%)
Sequence:
GTGAGGGCGCTGCGCGGCTGGCCGCTGGCCTGGTTCCTGCTCGCCCTGGCCTTCGCCATCCGCCTGCTGAGC
CTGGGCAGCTATCCGCTGATGGACACCACTGAGGCCCGCTATGGCGAGGTGGCGCGGAAGATGGCCGAACTG
GGCGACTGGATCACGCCCTGGTACGACGTCGGCGTGCCGTTCTGGGGCAAGCCGCCGCTGGCCTTCTGGCTC
AGCGCCGGCGGCCAGCTTCTGCTCGGCGCCAACGAGTTCGCCAGCCGCCTGCCGCACTGGTTGCTGGGCGTG
CTGGTGCTGTGGCTGGTATGGGACTGGCAGGCTCGCGAAGATCGTCGGCAGGCGCGGATCGCCTGCGTCCTG
CTGGGCAGTTCGGCGCTGTTCTTCGTCGCCTCCGGGGCGGTGATGACCGACATGGCCCTGGCCCTGGCCCTG
GTCCTGACCATGCGCGGCTTCTGGCTGGGCCTGCATGGCGCGGAGGGAATCCGGCGCCGCGAGGGCTGGCTG
ATGTTCCTCGGCCTCGGCCTCGGGCTGCTGGCGAAAGGGCCGCTGACGCTGATCCTCGCCGGACTGCCGATC
GGCCTGTGGGCCTTGCTGGAGTGGCGCTGGCGCGCGCTCTGGCGGGGCCTGCCATGGATCCGCGGAAGCCTG
CTGATGCTCCTGGTGGCGGCGCCCTGGTACCTGCTGGCGGAGTTGAAGACGCCGGGCTTCCTCGAGTACTTC
CTGCTCGGCGAGCATTGGCAGCGCTTCGTCACCGCCGGCTGGGACGGCGACCGCTACGGCAATGCCCACGCC
TATCCCTACGGCAGCGTCTGGCTGTTCCTGCTGGCCGCCGCGTTTCCCTGGAGCCTCTGGTTGCCGCTGCTG
CTCTGGCTGGGCTGGCGCCAGCGCGGGGAGGTGGTCGATGGCGTCGCCTCGCGCAGGCGCTACTGGCTGTTC
TGGGGACTGGCGCCGTGCCTGTTCTTCACCTTCGCCGGCAACGTCCTCTGGACCTACGTGCTGCCCGGCCTG
CCGGCCCTGGCGTTGCTCGCCGCCGACCTGCTGCGCGCGCCGCTGGCGCGCAGCGCCTGGCTGCGGCGTGGC
GGGCTGGCCTGCCTGGCGCTGACGCCGTTGCTGTTCGCGCTGTTCCTCGGCTCCCTGCTGCTGGGCTCGCGC
GCCGAGCAGAAGTCCACCGCCGCGCTGCTGGCCAGCGACGCCGGCTGGCGCGAGCGGCCGCTGGTGTTCTGG
CCGAAGCGGCCGTACTCGGCAGTGTTCTACAGCGGCGGGCGGGCACAACGGGCGGAGGACAGCGAACTGGCC
GGCTGGTTGCGTCGCGACGCCCTGCTGGCGATCCGCTCGCGTTCGTTCGGCGCCTTGCCCGACGAGGTGCGC
CAGCGCTTGCGCTGCCGGCCGCCGGTGGGACAGTACCAGCTATGCCAGGGCGTGGCGCCGCCTGGCTGA
Translation:
MRALRGWPLAWFLLALAFAIRLLSLGSYPLMDTTEARYGEVARKMAELGDWITPWYDVGVPFWGKPPLAFWL
SAGGQLLLGANEFASRLPHWLLGVLVLWLVWDWQAREDRRQARIACVLLGSSALFFVASGAVMTDMALALAL
VLTMRGFWLGLHGAEGIRRREGWLMFLGLGLGLLAKGPLTLILAGLPIGLWALLEWRWRALWRGLPWIRGSL
LMLLVAAPWYLLAELKTPGFLEYFLLGEHWQRFVTAGWDGDRYGNAHAYPYGSVWLFLLAAAFPWSLWLPLL
LWLGWRQRGEVVDGVASRRRYWLFWGLAPCLFFTFAGNVLWTYVLPGLPALALLAADLLRAPLARSAWLRRG
GLACLALTPLLFALFLGSLLLGSRAEQKSTAALLASDAGWRERPLVFWPKRPYSAVFYSGGRAQRAEDSELA
GWLRRDALLAIRSRSFGALPDEVRQRLRCRPPVGQYQLCQGVAPPG*
AnnotationID:785GeneID:776
AnnotatorUID: diggins
Modification Date/Time: 2005-03-11 06:06:15
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:PA4818
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:14215
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:18697
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
ReferenceID:35231
Author/Investigator(s):
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:Misc (text/plain)
Data:776_cdd.html
URL:
Homologs By Global Alignment
Gene ID:776

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
1381 PA4818_tr translation of PA4818 478 99.79 99.79 0 2569.0
50833 gb|AAG08203.1|AE004895_3 (AE004895) conserved hypothetical protein [Pseudomonas aeruginosa PAO1] 478 99.58 99.79 0 2566.0
50837 gb|AAN33345.1|AE014517_5 (AE014517) dolichyl-phosphate-mannose-protein mannosyltransferase family protein [Brucella suis 1330] 500 41.20 54.40 44 866.0
50838 gb|AAL54341.1| (AE009741) MELITTIN RESISTANCE PROTEIN PQAB [Brucella melitensis 16M] 500 41.00 54.20 45 861.0
50834 gb|AAN65667.1|AE016193_8 (AE016774) sugar transferase, putative [Pseudomonas putida KT2440] 509 40.07 56.58 56 938.0
GC ORFID: 43778How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA4818Glimmer Score:
Start: 4943629Stop: 4942193
Length: 1437
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA4818 translation of PA4818Homolog Bit Score 994.0
Other Homologs: t_PA4818 (ORF: GLIMMER)
GC ORF Sequence
GTGAGGGCGCTGCGCGGCTGGCCGCTGGCCTGGTTCCTGCTCGCCCTGGCCTTCGCCATCCGCCTGCTGAGC
CTGGGCAGCTATCCGCTGATGGACACCACTGAGGCCCGCTATGGCGAGGTGGCGCGGAAGATGGCCGAACTG
GGCGACTGGATCACGCCCTGGTACGACGTCGGCGTGCCGTTCTGGGGCAAGCCGCCGCTGGCCTTCTGGCTC
AGCGCCGGCGGCCAGCTTCTGCTCGGCGCCAACGAGTTCGCCAGCCGCCTGCCGCACTGGTTGCTGGGCGTG
CTGGTGCTGTGGCTGGTATGGGACTGGCAGGCTCGCGAAGATCGTCGGCAGGCGCGGATCGCCTGCGTCCTG
CTGGGCAGTTCGGCGCTGTTCTTCGTCGCCTCCGGGGCGGTGATGACCGACATGGCCCTGGCCCTGGCCCTG
GTCCTGACCATGCGCGGCTTCTGGCTGGGCCTGCATGGCGCGGAGGGAATCCGGCGCCGCGAGGGCTGGCTG
ATGTTCCTCGGCCTCGGCCTCGGGCTGCTGGCGAAAGGGCCGCTGACGCTGATCCTCGCCGGACTGCCGATC
GGCCTGTGGGCCTTGCTGGAGTGGCGCTGGCGCGCGCTCTGGCGGGGCCTGCCATGGATCCGCGGAAGCCTG
CTGATGCTCCTGGTGGCGGCGCCCTGGTACCTGCTGGCGGAGTTGAAGACGCCGGGCTTCCTCGAGTACTTC
CTGCTCGGCGAGCATTGGCAGCGCTTCGTCACCGCCGGCTGGGACGGCGACCGCTACGGCAATGCCCACGCC
TATCCCTACGGCAGCGTCTGGCTGTTCCTGCTGGCCGCCGCGTTTCCCTGGAGCCTCTGGTTGCCGCTGCTG
CTCTGGCTGGGCTGGCGCCAGCGCGGGGAGGTGGTCGATGGCGTCGCCTCGCGCAGGCGCTACTGGCTGTTC
TGGGGACTGGCGCCGTGCCTGTTCTTCACCTTCGCCGGCAACGTCCTCTGGACCTACGTGCTGCCCGGCCTG
CCGGCCCTGGCGTTGCTCGCCGCCGACCTGCTGCGCGCGCCGCTGGCGCGCAGCGCCTGGCTGCGGCGTGGC
GGGCTGGCCTGCCTGGCGCTGACGCCGTTGCTGTTCGCGCTGTTCCTCGGCTCCCTGCTGCTGGGCTCGCGC
GCCGAGCAGAAGTCCACCGCCGCGCTGCTGGCCAGCGACGCCGGCTGGCGCGAGCGGCCGCTGGTGTTCTGG
CCGAAGCGGCCGTACTCGGCAGTGTTCTACAGCGGCGGGCGGGCACAACGGGCGGAGGACAGCGAACTGGCC
GGCTGGTTGCGTCGCGACGCCCTGCTGGCGATCCGCTCGCGTTCGTTCGGCGCCTTGCCCGACGAGGTGCGC
CAGCGCTTGCGCTGCCGGCCGCCGGTGGGACAGTACCAGCTATGCCAGGGCGTGGCGCCGCCTGGCTGA