|
|
|
Modification Date/Time: | 2006-04-06 13:01:23 |
|
|
|
|
|
|
|
|
|
|
|
|
Missense Discrepancy: | FALSE |
|
Comments: Homology: gb|AAG04720.1|AE004562_7 (AE004562) conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 515/515 (100%), Positives = 515/515 (100%)
|
Sequence:
ATGGAATGGATAGCTGACCCGACTGCCTGGCTCGGCCTGGCGACCCTGATCGTGCTGGAGATCGTCCTCGGC
ATCGACAACCTGGTGTTCATCGCGATCCTCGCCGACAAGCTGCCGCCGCACCTGCGCGACCGCGCCCGGGTC
CTCGGCCTGTCGCTGGCGCTGCTGATGCGCCTGGGCCTGCTGGCGAGCATCTCGTGGATGGTGACCCTCACC
GAGCCGCTGTTCGAGGTATTCGGCAAGAGCTTCTCCGGCCGCGACCTGATCATGCTGTTCGGTGGCGTGTTC
CTGCTGTTCAAGGCCACCATGGAGCTGCACGAACGCCTCGAAGGCCATGTCGCCCAGCACGCCGGCAACAAG
ACCTACGCGCTGTTCTGGCCGATCGTCGCGCAGATCGTGGTGCTCGACGCGGTGTTCTCGCTCGACGCGGTG
ATCACCGCAGTGGGCATGGTCGAGCACCTGGAAGTGATGATGATCGCGGTGATCGTCTCCATCGGCCTGATG
ATCGTCGCCAGCAAGCCGCTGACCCGCTTCGTCAATCGTCACCCGACGGTGATCATGCTGTGCCTGGGCTTC
CTGATGATGATCGGCTTCAGCCTGACCGCCGAGGGCCTGGGCTTCCATATCCCGAAAGGCTACCTGTACGCG
GCCATCGGCTTCTCGATCCTCATCGAGGTGTTCAACCAGGTCGCCCGCAAGCGCCGCAAGAAGAGCCTGCAG
GGCCACCGCCCGCTGCGCGCACGTACCGCCCATGCGGTGCTGCGCCTGCTCGGCGGCCAGCGCCTGGAGGCC
GACGAGGTCGGCGAGGAAGTCGCCGACCTGTTCGAGGAGGGCGACGACCAGGTGGTCTTCGACCGCCGCGAG
CGGGTGATGATCAGCGGTGTGCTGCAATTGGCCGAGAAGCCCATCCGCAGCCTGATGACGGTACGCGCCGAG
GTCGACTGCATCGACCTCGACAGCGGCCGCGAGGCGATCCGCGCGGCGCTGCTCGAATCGTCCTACTCGCGC
CTGCCACTGGTGCGCGACGGGCGCGTCGAGGAGCCGCTGGGCTACGTGCACAAGAAGGAACTGCTCAAGGAG
CTGCTCGCCGGCGCCCAGCCGGACCTGGAAAGCCTGGCCCGCCAGCCGCTCAACCTGTTGCAGGACTGTTCG
ATCCTCAATGCCCTGGAGCAGATGCGCGAGGCCTCGACCCACGTGGCCTTCGTGGTCAACGAGTTCGGCGAA
TTCATCGGCCTGCTGACCCTGACCGACATTCTCGAATCCATCGCCGGCGAGCTGCCCGACGCCAGCGAGATC
GACGGTCCGGACGTGGTCGAGGAGAACGACGGCTACCTGGTCAGCGGTGCCATGAACCTCAGCCAGGTGCGT
CGACGCGTGGGGTTCGACGCGCGCGCCACGGAGGACTACCAGACCCTCGCCGGGCTGGTGATGAGCCTGCTC
GACCGCCTGCCGGTGATCGGCGACCGCCTGCAGTGGCAGGACTGGGAACTGCGGGTGGTGGAAGTGGAAGAA
CGCCGGGTGACCCGGGTCCTGCTGCGCAGGGGCTGA |
Translation:
MEWIADPTAWLGLATLIVLEIVLGIDNLVFIAILADKLPPHLRDRARVLGLSLALLMRLGLLASISWMVTLT
EPLFEVFGKSFSGRDLIMLFGGVFLLFKATMELHERLEGHVAQHAGNKTYALFWPIVAQIVVLDAVFSLDAV
ITAVGMVEHLEVMMIAVIVSIGLMIVASKPLTRFVNRHPTVIMLCLGFLMMIGFSLTAEGLGFHIPKGYLYA
AIGFSILIEVFNQVARKRRKKSLQGHRPLRARTAHAVLRLLGGQRLEADEVGEEVADLFEEGDDQVVFDRRE
RVMISGVLQLAEKPIRSLMTVRAEVDCIDLDSGREAIRAALLESSYSRLPLVRDGRVEEPLGYVHKKELLKE
LLAGAQPDLESLARQPLNLLQDCSILNALEQMREASTHVAFVVNEFGEFIGLLTLTDILESIAGELPDASEI
DGPDVVEENDGYLVSGAMNLSQVRRRVGFDARATEDYQTLAGLVMSLLDRLPVIGDRLQWQDWELRVVEVEE
RRVTRVLLRRG* |
AnnotationID:782 | GeneID:773 |
|
Modification Date/Time: |
2005-02-23 07:07:48 |
|
|
|
GeneProduct: | putative membrane protein, TerC family |
|
|
|
Cell Localization Confidence Code: | 5 |
|
|
Functional Category: | (15) Membrane proteins |
|
Alternate Gene Product Name: | putative transport protein |
|
Functional Category Confidence Code: | 5 |
|
|
Secondary Functional Category(ies): | transport of small molecules |
|
|
|
|
Homology: | >gb|AAN69039.1|AE016536_7 (AE016786) CBS domain protein [Pseudomonas putida KT2440]
Length = 523
Score = 822 bits (2122), Expect = 0.0
Identities = 419/512 (81%), Positives = 461/512 (90%)
>gb|AAO56039.1| (AE016864) membrane protein, TerC family [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 522
Score = 788 bits (2035), Expect = 0.0
Identities = 397/514 (77%), Positives = 454/514 (88%)
>emb|CAC90350.1| (AJ414148) putative membrane protein [Yersinia pestis CO92]
Length = 528
Score = 517 bits (1331), Expect = e-146
Identities = 280/515 (54%), Positives = 364/515 (70%), Gaps = 6/515 (1%) |
|
Structural Features: | COG1253, TlyC, Hemolysins and related proteins containing CBS domains.
CD-Length = 429 residues, 98.1% aligned
Score = 292 bits (749), Expect = 5e-80
Identities = 118/422 (27%), Positives = 204/422 (48%), Gaps = 6/422 (1%)
COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance
[Inorganic ion transport and metabolism]
CD-Length = 254 residues, 97.2% aligned
Score = 269 bits (689), Expect = 6e-73
Identities = 136/247 (55%), Positives = 168/247 (68%), Gaps = 4/247 (1%)
pfam03741, TerC, Integral membrane protein TerC family.
CD-Length = 222 residues, 99.5% aligned
Score = 190 bits (483), Expect = 5e-49
Identities = 81/221 (36%), Positives = 120/221 (54%), Gaps = 8/221 (3%) |
|
|
|
|
|