ViewGene

Locus Name:
GeneID:
Location:

GeneID: 767

TrivialName: PA14_35020

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_35020

PAO1 Ortholog Locus: PA2286

Sequence Length: 1545

Protein Length: 514

Start: 3119106

Stop: 3117562

Strand: -

Type:

ChromosomeID: 2

Status: ACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAG05674.1|AE004654_5 (AE004654) hypothetical protein [Pseudomonas aeruginosa PAO1] Identities = 510/514 (99%), Positives = 512/514 (99%)

Sequence:

GTGAAGGGCACGGTCCATCCGCGAAGGCTGCTGCTTTGCCTGGTGCTGGTTCCAGCGCTGCTGGCGGGGCTC
GGCGCCTGGCAGTCCTGGCGCGCCGAGCAGCAGGCCGAGCGACTGGGCGCCGCGCAGCAGCGGGTCGAGCGC
GCGCTCGCCGAAGCGCGGGCGCTGCCGCCGAGGGCCAGCGTCCGGGTCGACGGCCGGGCCTATGTGCGCGAC
CTGGCCCTGGCGCGGCTCGACGAGCAACTCGCCGACACACGAAGCGCACAGCGCCTGAATCGCTTCGCCGCC
GTCCTCGCCGATAGCGGAGCCTGCCTGGCGGCGCTGGTCGCCGTGCTGGGAGCCGTCTCCCTGGCCGGCATC
GCCGGCGCCGCACGCAGCGCACTGCGCTCGCGTCGCTGCCTGCTCCTGTGGTTCGAGCTGGGCCGACGCCTG
CTGCCCTGCCTGCTCCTCGCCCAGATCGGCCTGCTCGCCCTGGCCCTGGCCTGTGCCGGAACGTTCGAGATC
CTCGGGCTATGGCGGGTCGGCCAGGTTCCGGTCAGCGAAGGACGCACTCAACTGAGCGTGGCGCTGATCCTT
CTCGGCCTGCTGGCGTCGGCGTGGCAAATGCTGGCGAAGATCAGCCGCTTGCGCCTGCGCCCGGCGCCGGCC
CTGGATGTCATCGGCCGCCGGCTGGGCGAAGAGGATGCACCGGAACTCTGGACGCTACTGCGCGAGCTGGCG
GCGCGCCTCGACACGCCAGCCCCGCAGCACCTGTTGGTAGGTCTCTGCGACGGCTTCTACGTGACCGCCAAC
CGCGTCTGCCTGCAACCTTCCGGCGAGCATCTGGAAGGACGCAGCCTATACCTCTCGCTACCGTTGCTGGGC
CTGCTGGACCGCGCCGAACTGAGTGCAGTGATCGCTCACGAACTGGCCCACTTCGCCGGCCGCGACGCCCAT
TACAGCCTGCGCTTCCTGCCGATCTACCAGGGCGCCGCGAGCCAACTGGCCGCCATCGAGGAGCAGGAAGCC
AACGTCTTCGAACGTGCGGCACTGGAACCGGCGCGACTGTTGGCCGGGTACTTCCTCGAACGTTTCGGCCTC
GCCGTGAACCACTGGAGCCGCCTGCGCGAATTCGCCGCCGACCGCCGCGCCGCACAACTGGCCGGTGCGCCG
GCGATGGCCTCGGCCCTGCTGCGCAGCGCGGCGGCCGGCGCGCCGATACGGGCGTTCCTCGAACACTGCCTG
CTCGCTCCGGCGCGCGCGCCGGACAACCTGGTGGACGCCATCCACGTCTACCTGGGCCAGTCCGGCCTGGAA
GCACCGGACCCCGGGGCGGAGGGACTCCAGGTCCATCCGCAGGATACCCACCCTCCGCTGGGCCTGCGCTGC
ACGGCGCTGGGAGAGAGCTTCGAACGCACCTGGGCCGGGACCGCCGGCCGGGCCGTTCCGACACGACCGCCG
AGCCAGGCGCTGAGCGTCTGGTTCGGCGCCCCCCTGGCGTTGAGCCGAGCGCTCAGCGCCGACCTGCTCGGC
AAGACCTGTGAGAATCCCCATGCAAGAAACTGA

Translation:

MKGTVHPRRLLLCLVLVPALLAGLGAWQSWRAEQQAERLGAAQQRVERALAEARALPPRASVRVDGRAYVRD
LALARLDEQLADTRSAQRLNRFAAVLADSGACLAALVAVLGAVSLAGIAGAARSALRSRRCLLLWFELGRRL
LPCLLLAQIGLLALALACAGTFEILGLWRVGQVPVSEGRTQLSVALILLGLLASAWQMLAKISRLRLRPAPA
LDVIGRRLGEEDAPELWTLLRELAARLDTPAPQHLLVGLCDGFYVTANRVCLQPSGEHLEGRSLYLSLPLLG
LLDRAELSAVIAHELAHFAGRDAHYSLRFLPIYQGAASQLAAIEEQEANVFERAALEPARLLAGYFLERFGL
AVNHWSRLREFAADRRAAQLAGAPAMASALLRSAAAGAPIRAFLEHCLLAPARAPDNLVDAIHVYLGQSGLE
APDPGAEGLQVHPQDTHPPLGLRCTALGESFERTWAGTAGRAVPTRPPSQALSVWFGAPLALSRALSADLLG
KTCENPHARN*

AnnotationID:776 GeneID:767

AnnotatorUID: diggins

Modification Date/Time: 2005-03-04 11:11:06

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms: PA2286

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:14213

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:18679

Author/Investigator(s): GenNotator

Title: CDD Search

PubMed:

MedLine:

Source:

Reference Type: RPSBLAST

Data:

URL:

ReferenceID:32499

Author/Investigator(s):

Title: CDD Search

PubMed:

MedLine:

Source:

Reference Type: Misc (text/plain)

Data: 767_cdd.html

URL:

Homologs By Global Alignment

Gene ID:767

Identity:

10%

20%

30%

40%

50%

60%

70%

80%

90%

100%

HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score

1348 PA2286_tr translation of PA2286 514 99.22 99.61 0 2575.0

49843 gb|AAG05674.1|AE004654_5 (AE004654) hypothetical protein PA2286 [Pseudomonas aeruginosa PAO1] 514 99.02 99.61 0 2572.0

GC ORFID: `43769`	How Found: `BLASTX`
GC_TrimmedSeqID: `69`	Blast Result ID
Subject Sequence Name: `t_PA2286`	Glimmer Score:
Start: `1834810`	Stop: `1836354`
Length: `1545`
Start Codon: `GTG`	Truncated Start:
Stop Codon: `TGA`	Truncated Stop:
Homolog: `t_PA2286 translation of PA2286`	Homolog Bit Score `996.0`
Other Homologs: `t_PA2286 (ORF: GLIMMER)`
GC ORF Sequence
GTGAAGGGCACGGTCCATCCGCGAAGGCTGCTGCTTTGCCTGGTGCTGGTTCCAGCGCTGCTGGCGGGGCTC GGCGCCTGGCAGTCCTGGCGCGCCGAGCAGCAGGCCGAGCGACTGGGCGCCGCGCAGCAGCGGGTCGAGCGC GCGCTCGCCGAAGCGCGGGCGCTGCCGCCGAGGGCCAGCGTCCGGGTCGACGGCCGGGCCTATGTGCGCGAC CTGGCCCTGGCGCGGCTCGACGAGCAACTCGCCGACACACGAAGCGCACAGCGCCTGAATCGCTTCGCCGCC GTCCTCGCCGATAGCGGAGCCTGCCTGGCGGCGCTGGTCGCCGTGCTGGGAGCCGTCTCCCTGGCCGGCATC GCCGGCGCCGCACGCAGCGCACTGCGCTCGCGTCGCTGCCTGCTCCTGTGGTTCGAGCTGGGCCGACGCCTG CTGCCCTGCCTGCTCCTCGCCCAGATCGGCCTGCTCGCCCTGGCCCTGGCCTGTGCCGGAACGTTCGAGATC CTCGGGCTATGGCGGGTCGGCCAGGTTCCGGTCAGCGAAGGACGCACTCAACTGAGCGTGGCGCTGATCCTT CTCGGCCTGCTGGCGTCGGCGTGGCAAATGCTGGCGAAGATCAGCCGCTTGCGCCTGCGCCCGGCGCCGGCC CTGGATGTCATCGGCCGCCGGCTGGGCGAAGAGGATGCACCGGAACTCTGGACGCTACTGCGCGAGCTGGCG GCGCGCCTCGACACGCCAGCCCCGCAGCACCTGTTGGTAGGTCTCTGCGACGGCTTCTACGTGACCGCCAAC CGCGTCTGCCTGCAACCTTCCGGCGAGCATCTGGAAGGACGCAGCCTATACCTCTCGCTACCGTTGCTGGGC CTGCTGGACCGCGCCGAACTGAGTGCAGTGATCGCTCACGAACTGGCCCACTTCGCCGGCCGCGACGCCCAT TACAGCCTGCGCTTCCTGCCGATCTACCAGGGCGCCGCGAGCCAACTGGCCGCCATCGAGGAGCAGGAAGCC AACGTCTTCGAACGTGCGGCACTGGAACCGGCGCGACTGTTGGCCGGGTACTTCCTCGAACGTTTCGGCCTC GCCGTGAACCACTGGAGCCGCCTGCGCGAATTCGCCGCCGACCGCCGCGCCGCACAACTGGCCGGTGCGCCG GCGATGGCCTCGGCCCTGCTGCGCAGCGCGGCGGCCGGCGCGCCGATACGGGCGTTCCTCGAACACTGCCTG CTCGCTCCGGCGCGCGCGCCGGACAACCTGGTGGACGCCATCCACGTCTACCTGGGCCAGTCCGGCCTGGAA GCACCGGACCCCGGGGCGGAGGGACTCCAGGTCCATCCGCAGGATACCCACCCTCCGCTGGGCCTGCGCTGC ACGGCGCTGGGAGAGAGCTTCGAACGCACCTGGGCCGGGACCGCCGGCCGGGCCGTTCCGACACGACCGCCG AGCCAGGCGCTGAGCGTCTGGTTCGGCGCCCCCCTGGCGTTGAGCCGAGCGCTCAGCGCCGACCTGCTCGGC AAGACCTGTGAGAATCCCCATGCAAGAAACTGA