ViewGene
Locus Name:
GeneID:
Location:

GeneID:7447
TrivialName: PA14_59730
AnnotatorUID: urbach
Modification Date/Time:2006-07-03 16:04:02
LocusName:PA14_59730
PAO1 Ortholog Locus:RL042
Sequence Length:2614
Protein Length:866
Start: 5314894
Stop: 5317507
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: TRUE
Missense Discrepancy:FALSE
Comments:
Frame discrepancy relative to gene sequenced in PA14 by He et al.
Sequence:
atgttctgccacgttgaggcacggcgcaccggcaaactgccgctggctctgggcggcctagcgctggccttc
gcgggcctggccaatggagaggcgcagtatcgtttcgacgacagcctgttgatgggctcgggcctcgccggc
gggaccctagaacgcttcaaccgggccaaccaggtggaccccggaacctaccatgtcgatgtctatctcaac
ggcagctacgccagtcgcaccaggatcgagttccgcccccgggccggcggcgtcaaaccctgcttcggcgaa
cgcttcttgcgccggacgctgggcgtccgccccgccctctgaggccggcgtgcaagcgcctggagattgcct
ggggctggaagaacgcctgccaggctcgaccttcaatctcgacaccgcccttctgcgcctcgatctctcggt
gccccaggccctgctggatatcaagccacgcggctacgtgggtcccgacgagtgggacgctggcagtagcat
gggcttcgtcaactacgacgccagcttctatcgctcgagcttcgacggagtaggcggcaacggcgactcgga
ctatggctacctggggctgagcgggggcatcaatttcggcctgtggcgcctgcgccaccagtccaactacag
ctactccagctatgcgggaaacacccgcagcgactggaacagcatccgcacctatgcccagcgcgcggtgcc
aggcctgcgcagcgaactgaccctgggcgagagcttcaccgagggcaatctgttcggcagcctgggttatcg
cggcgtgcgcctggccagcgacgaccgcatgctggcagactcgcaacgccgctatgctccacaggtacgcgg
tacagcgaacagcaacgcacgggtggtcatcagccagaacggcaagaaggtccacgaatccgccgtcgctcc
cggtcccttcgtcatcaacgacctctatggcaccgcctacgacggcgatctggatgtccaagtgattgaggc
cgacggcagcgtctcgcgcttttccgtgcccttttccgcggttcccgaatccatgcgcccgggcatctcgcg
ctacagcgccaccctcggccaagcgcgccagtatggcgacggcaacgacctgttcggcgacttcacctatca
gcgcggcctgaccaactcgctaaccgccaacctcggctcgcgcctggccgaggactatctggcgctgctcgg
cggaggcgtgctcgccacgccctacggagccttcggcttcaacagcatcttttcccatgccacggtggagaa
cggccagcgcaagcagggctggcgtgtcggtctgaactacagccggaccttccagccgacccagaccactct
caccctggctggctaccgctattccaccgagggctatcgcgacctcggcgacgcgctttcggcgcgccacgc
cgatgagcacaacgactcctggaactccagcagctacaagcaacgcaaccagttcaccctgctggtcaacca
gggcctggggggctacggcaacctgtatctgtccggagccaccagcgactactacgacggcaagagccgcga
cacccagttgcagttcggctacagcaacacttggcgccagctcagctacaacctcgcctattcgcgccagca
gaccacctggtaccgcgatctgaacgacgactacgacccgtcactgccgccgcaatacaacctgcggcacgg
cagcgaacgtagcaacaccttaaccctgacactttccatgccgctggggtcctccagccaggccccgaatct
cagcgcgatggcctcccggcgttccggcgacagccgcggcagcagctaccagacgggcctcaacggcaccct
cgacgaagaccgcagcctgagctacgcgattgccgccgggcgcgacagcgacaaccacggcagcgatttcaa
cggcagtctgcagaaacagacctcggtggcgacgctgaacgccggctatgccgagaacagcagctaccggca
gctcaacaccggcctgcgcggcgccgccgtgctgcatcgcggcggcctgaccctcggcccctacgtcggcga
cactttcgccctggtcgaggccaagggcgccagcggagctggcgtacgcggtggtcagggcgcgcgcgtcaa
cggcaatggctacgccgtggtgccatcactctcgccctaccgctacaacccggtcagcctcgatccgcaggg
catgggcgaagaggccgagctgctggagaccgagcgcaagatcgcgccatacgccggcgccgccgtgcatgt
gaagttccgcacactgaccggtcacccattgctaatccaggcccaactcgccgacggcagcgcgctaccgct
aggggccaatgtgctcgacagccagggtgtgaacatcggcatggtcggtcaaggcggccaggtctatgcccg
cgccgagggcgacaagggccgcctgcgcgtgcaatggagcgaacgcccaggggacgcctgtctgctggatta
cgacctcgacactggccctcgccaggctatcgaacccggacaggcggtgatccgcctgcagggcacctgcac
gcccgtctcggaggcaccatga
Translation:
MFCHVEARRTGKLPLALGGLALAFAGLANGEAQYRFDDSLLMGSGLAGGTLERFNRANQVDPGTYHVDVYLN
GSYASRTRIEFRPRAGGVKPCFGERFLRRTLGVRPAL*GRRASAWRLPGAGRTPARLDLQSRHRPSAPRSLG
APGPAGYQATRLRGSRRVGRWQ*HGLRQLRRQLLSLELRRSRRQRRLGLWLPGAERGHQFRPVAPAPPVQLQ
LLQLCGKHPQRLEQHPHLCPARGARPAQRTDPGRELHRGQSVRQPGLSRRAPGQRRPHAGRLATPLCSTGTR
YSEQQRTGGHQPERQEGPRIRRRSRSLRHQRPLWHRLRRRSGCPSD*GRRQRLALFRALFRGSRIHAPGHLA
LQRHPRPSAPVWRRQRPVRRLHLSARPDQLANRQPRLAPGRGLSGAARRRRARHALRSLRLQQHLFPCHGGE
RPAQAGLACRSELQPDLPADPDHSHPGWLPLFHRGLSRPRRRAFGAPRR*AQRLLELQQLQATQPVHPAGQP
GPGGLRQPVSVRSHQRLLRRQEPRHPVAVRLQQHLAPAQLQPRLFAPADHLVPRSERRLRPVTAAAIQPAAR
QRT*QHLNPDTFHAAGVLQPGPESQRDGLPAFRRQPRQQLPDGPQRHPRRRPQPELRDCRRARQRQPRQRFQ
RQSAETDLGGDAERRLCREQQLPAAQHRPARRRRAASRRPDPRPLRRRHFRPGRGQGRQRSWRTRWSGRARQ
RQWLRRGAITLALPLQPGQPRSAGHGRRGRAAGDRAQDRAIRRRRRACEVPHTDRSPIANPGPTRRRQRATA
RGQCARQPGCEHRHGRSRRPGLCPRRGRQGPPARAMERTPRGRLSAGLRPRHWPSPGYRTRTGGDPPAGHLH
ARLGGTM
AnnotationID:7432GeneID:7447
AnnotatorUID: urbach
Modification Date/Time: 2006-07-03 16:04:29
Gene Name:cupD3
Confidence Code:3
GeneProduct:putative fimbrial biogenesis usher protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(16) Motility & Attachment
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG3188, pfam00577
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
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Structural Features:






   
Genomic Context:






   
Comment:


















    ReferenceID:38391




  
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Reference Type:MISC 







    
Data:


    		




 
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