ViewGene
Locus Name:
GeneID:
Location:

GeneID:7429
TrivialName: PA14_67975
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_67975
PAO1 Ortholog Locus:PA5146
Sequence Length:2253
Protein Length:750
Start: 6065872
Stop: 6068124
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
GID 6867 (PA14_67980) replaced by GID7429 (PA14_67975). Homology: PA5146 [gene=PA5146] [prot=hypothetical protein], Length = 750, Score = 1456 bits (3769), Expect = 0.0, Identities = 741/750 (98%), Positives = 746/750 (98%)
Sequence:
atgaaagcattcggcaaggtcctggggctgttcttcctgggactcttactgctcgtcgtggccctgggcttc
gccctgacccacctgttcgatcccaatgactacaaggacgaaatccgccagatcgcccgcgacaaggccaac
ctggagctggacctgaagggcgacatcggctggagcctgttcccctggctgggcctggagctgcacgacacc
agcatcgccagtaccgccacgccgaccaagccgttcgccgacctgcagatgctcggcctgtcggtgcgggtc
ctgccgctgctgcgcaaggacgtgcagatgagcgcgatccgcgtcgaaggcctgagcctggacctggtccgc
gacaagcagggcaagggcaactgggaaaacatcggcaagccggcccagccccaggccccgtccgctccttcc
gccaccccgccggcagcggacggcaagggcgcccaggcgcaggcacccgagcaggcgccgcagaacgacagc
ccgcgcaccccgatcaagctcgacatcgacagcctcaacgtcaacaacgcccgcgtcacctacaccgacgaa
gccagcggcaagcagtacaacgtcgagggcatcgagctgagtaccggcgccattcgcgaaggcagcagcatt
ccgctgaagctcaacgcctacctcggcaccaaccagccggtggtgcgggtcaagaccgagctgaccggcaac
ctgcgcttcgacaccgcgctcaggcgctaccagttggaagacgccaggctctccggcgaggcctcgggcgag
ccgctgcaaggcaagaccgccaccttctccgcccagggccagttgctgctcgaccagtcggcgcagatcgcc
gagtggaacggtctgaagctgagcgtcaaccagttgcgcgccctcggcgaactgaaggcccgcgagctggac
aaggacgccaagttcagcggcggcctgtcgatcgcgccgatgaacctgcgcgagttcctcgccggcatcggt
gtgaccctgccggccatggccgacgccaacaccctcggcaagttcgagctgaacacccgcctggccggcagc
cgcaacagcctgaatctcgaagacctcaagctgggcctggacgacaccgccttcagcggccgcttcggcatc
gccgatttcgccaggcaatcgctgcgcgcccagctcaagggcgacaagctcgacctcgaccgctacctgccg
gccaaggccaagcaggcccaggatgccgccagcgccacgcgcaaggcggaagtcgacgccaccgtggccagt
gccgcccagggcaacacgccgctaccggaaaaaccgaccaggcaggcctggagcgacgcgccgttgctgccc
atggcgaccctgcgcaagctcgacctggacgtggcgctgagcttcggtcggctgaccgtcgagaagctgcca
atcgacgacgccagcctgaagctgcgtggccagggcggcgtgatcagcctcgacgacatgcgcggcgggctg
tacaacggccgcttcaacgccaaggccaacctcgacgtacgccaggacagcgccgtgttgaccgccaccaag
cacatcgccaacgtgccggtggagcgcctgctcgaagcccagggcaagaaaccgccggtgaaggggctgctc
gacctcgacgccgacatccgcaccagcggcaacagcgagaagtcctggatcgaccatctcaacggcagcgca
cgcttcagcctgatcaacggcgtgctgctcgacgccaacctggagcaacagctctgccagggcatcgctacc
ctcaaccgcaaggcccttgccggtacccacggcggcaaggacacgcctttccgcgagctcaagggcagcctg
aacttcaccaacggcgtggccagcaaccctgacctgaaggtcgccatccccggcctggcggtcagcggccac
ggcgatatcgacctgcgcgtgctgggcatggactatcgcatcggcgtggagatccagggcgacaagagcgac
atgccggacccggcctgccaggtcaaccagcgctacgccggcatcgaatggcctctgctctgccgcggcccg
ctggaactcggcgccaaggcctgccgcctggacaaggaaggcctgggcaaggtcgccgcgaaactggccggc
aatcgcctcaacgaaaaactcgaagagaagctcggcgacaaggtcagtccggagctgaaagacgcactcaaa
gggctgttcaaccgcaaatga
Translation:
MKAFGKVLGLFFLGLLLLVVALGFALTHLFDPNDYKDEIRQIARDKANLELDLKGDIGWSLFPWLGLELHDT
SIASTATPTKPFADLQMLGLSVRVLPLLRKDVQMSAIRVEGLSLDLVRDKQGKGNWENIGKPAQPQAPSAPS
ATPPAADGKGAQAQAPEQAPQNDSPRTPIKLDIDSLNVNNARVTYTDEASGKQYNVEGIELSTGAIREGSSI
PLKLNAYLGTNQPVVRVKTELTGNLRFDTALRRYQLEDARLSGEASGEPLQGKTATFSAQGQLLLDQSAQIA
EWNGLKLSVNQLRALGELKARELDKDAKFSGGLSIAPMNLREFLAGIGVTLPAMADANTLGKFELNTRLAGS
RNSLNLEDLKLGLDDTAFSGRFGIADFARQSLRAQLKGDKLDLDRYLPAKAKQAQDAASATRKAEVDATVAS
AAQGNTPLPEKPTRQAWSDAPLLPMATLRKLDLDVALSFGRLTVEKLPIDDASLKLRGQGGVISLDDMRGGL
YNGRFNAKANLDVRQDSAVLTATKHIANVPVERLLEAQGKKPPVKGLLDLDADIRTSGNSEKSWIDHLNGSA
RFSLINGVLLDANLEQQLCQGIATLNRKALAGTHGGKDTPFRELKGSLNFTNGVASNPDLKVAIPGLAVSGH
GDIDLRVLGMDYRIGVEIQGDKSDMPDPACQVNQRYAGIEWPLLCRGPLELGAKACRLDKEGLGKVAAKLAG
NRLNEKLEEKLGDKVSPELKDALKGLFNRK*
AnnotationID:7350GeneID:7429
AnnotatorUID: danlee
Modification Date/Time: 2006-03-20 18:06:17
Gene Name:
Confidence Code:4
GeneProduct:Putative outer membrane biogenesis protein
Cell Localization:()
Synonyms:PA5146
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:pfam05170, COG2982
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:
gi|9951446|gb|AAG08531.1|  hypothetical protein PA5146 [Pseudomonas aeruginosa PAO1]
 gi|15600339|ref|NP_253833.1|  hypothetical protein PA5146 [Pseudomonas aeruginosa PAO1]
Length=750

 Score = 1456 bits (3769),  Expect = 0.0
 Identities = 741/750 (98%), Positives = 746/750 (99%), Gaps = 0/750 (0%)

gi|84323767|ref|ZP_00971834.1|  COG2982: Uncharacterized protein involved in outer membrane biogenesis 
[Pseudomonas aeruginosa 2192]
Length=750

 Score = 1456 bits (3768),  Expect = 0.0
 Identities = 741/750 (98%), Positives = 746/750 (99%), Gaps = 0/750 (0%)

gi|84317784|ref|ZP_00966221.1|  COG2982: Uncharacterized protein involved in outer membrane biogenesis 
[Pseudomonas aeruginosa C3719]
Length=750

 Score = 1456 bits (3768),  Expect = 0.0
 Identities = 741/750 (98%), Positives = 746/750 (99%), Gaps = 0/750 (0%)








 
Structural Features:
pfam05170, AsmA, AsmA family. The AsmA gene, whose product is involved in the assembly of outer 
membrane proteins in Escherichia coli. AsmA mutations were isolated as extragenic suppressors 
of an OmpF assembly mutant. AsmA may have a role in LPS biogenesis..
             CD-Length = 691 residues,  96.8% aligned
             Score =  567 bits (1462), Expect = 2e-162

COG2982, AsmA, Uncharacterized protein involved in outer membrane biogenesis [Cell 
envelope biogenesis, outer membrane].
             CD-Length = 648 residues,  94.9% aligned
             Score =  331 bits (851), Expect = 1e-91






   
Genomic Context:






   
Comment: