ViewGene
Locus Name:
GeneID:
Location:

GeneID:7425
TrivialName: PA14_29375
AnnotatorUID:
Modification Date/Time:2006-08-22 20:08:33
LocusName:PA14_29375
PAO1 Ortholog Locus:
Sequence Length:762
Protein Length:253
Start: 2543870
Stop: 2543109
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ttggcccattgcccgatacccggcaaaaatgagatattcacgaacgtgaatcattctcatatttcaatccca
tctccccgcctgctgctggtcgaagacgacccgcgcctacgcgaggatctcgacgcgcatttccgccggcgc
ggcttccgcgtaaccgtctgcggcgatggctcgcacgggctggaagccgccgggcgcgaagcgttcgacctg
gtgctgctggacatcatgctgcccggcctcgacggtctggccctgctggagtcgctgcgccgcgagcaggcc
acgccggtgatgctgatgtcggccctgggcgccgagcaggatcgcatcagcggcttcacccgcggcgccgac
gactacctgccgaagccgttcagcctggccgagctggatgcccgcaccgacgccctgctgcgccgcgtacga
ctggaccgcctgccgtcgccgcagcggcgggatacccggctggtgttcgacgaccaggcccaggatgtgctc
cagcagggccttccggcggggctgacgccatccgaataccgcctcctggcgacgctccgcgaacatgccggc
gaggcgctgagcaagccgttcctctaccggagcgtgctgcaccgcagctacacgcgcctcgaccgcggtctc
gacgtgcacgtctgcaacctgcggcgcaagctcgccgcggtcgccgtccgtcacctgcagatccaggcggtg
cgcggccagggctacctgctggtggagacggaacacccctga
Translation:
MAHCPIPGKNEIFTNVNHSHISIPSPRLLLVEDDPRLREDLDAHFRRRGFRVTVCGDGSHGLEAAGREAFDL
VLLDIMLPGLDGLALLESLRREQATPVMLMSALGAEQDRISGFTRGADDYLPKPFSLAELDARTDALLRRVR
LDRLPSPQRRDTRLVFDDQAQDVLQQGLPAGLTPSEYRLLATLREHAGEALSKPFLYRSVLHRSYTRLDRGL
DVHVCNLRRKLAAVAVRHLQIQAVRGQGYLLVETEHP*
AnnotationID:7346GeneID:7425
AnnotatorUID: danlee
Modification Date/Time: 2006-03-20 12:12:11
Gene Name:
Confidence Code:3
GeneProduct:possible C-terminal fragment of two-component response regulator PfeR
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(28) Two-component regulatory systems
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG0745
Secondary Functional Category(ies):transcriptional regulators
EC Number:
Status:ACTIVE
Pathway:






 
Homology:
gi|9948758|gb|AAG06074.1|  two-component response regulator PfeR [Pseudomonas aeruginosa 
PAO1]
 gi|15597882|ref|NP_251376.1|  two-component response regulator PfeR [Pseudomonas aeruginosa 
PAO1]
 gi|2500742|sp|Q04803|PFER_PSEAE  Transcriptional activator protein pfeR
 gi|151437|gb|AAA25929.1|  putative
Length=305

 Score =  494 bits (1271),  Expect = 2e-138
 Identities = 248/253 (98%), Positives = 249/253 (98%), Gaps = 0/253 (0%)






 
Structural Features:
COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix
DNA-binding domain [Signal transduction mechanisms / Transcription].
             CD-Length = 229 residues, 100.0% aligned
             Score =  170 bits (431), Expect = 2e-43






   
Genomic Context:






   
Comment:
Lacking the first 52 amino acids of pfeR, PAO1 PA2686. 
248/253 (98%) identical to C-terminus of pfeR, PAO1 PA2686.