ViewGene

Locus Name:
GeneID:
Location:

GeneID:7424
TrivialName: PA14_36605
AnnotatorUID: danlee
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_36605
PAO1 Ortholog Locus:PA2162
Sequence Length:2781
Protein Length:926
Start: 3258839
Stop: 3261619
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
GeneID7206 (PA14_36600) and GeneID5916 (PA14_36610) by GeneID7424 (PA14_36605). Homology: PA2162 [gene=PA2162] [prot=probable glycosyl hydrolase], Length = 926, Score = 1858 bits (4814), Expect = 0.0, Identities = 917/926 (99%), Positives = 922/926 (99%)
Sequence:
atgattgagccccgcgctaccctgcgcctgcaattccacgccggcttcaccctcgacgatgccctgccctgg
ctggactatttcgccgacctgggcatcagccatctctacgcctcgccgctgttccgcgcgcggcccggctcc
agccacggctacgacgtggtcgacccgacccggatcaatccggaactgggcggcgagccggcgctgctgcgc
ctgatccaggggctgcggcaacgcggcatgggcctgctcatggacatagtgccgaaccacatgggcatcggc
ggcggcgccaatccctggtggcaggacgtgctcgaatgggggcgcgagagtccctacgcgagtttcttcgac
atccagtgggaatcccacgacgccgcgttgcgcggccaggtgctgctgccgttcctgcgcagcgactacggc
gaggtcctggctgccggggagatcggcctgagcctggaccgcgaggccggccgcctgctggcgagccacggc
gagcagcgcttccccctctggccgggcagctacccggagctgctggaagacagcggcgagccgcgcctgtca
gacctggccggcggtttccgcgagtgccggcaggaccgcgaggccttgcgcgagatgcagcgtcgactggcg
gctgcgctcgccgagagcgctccgcgcgccgccctggagcgcacgctgggcaagctccaggaacgccacgag
gaggctcgccaacgcctgcaccgcctgctcgaggcgcagcactaccgcctggccagctggcgcaccgcggcg
gacgacatcaactggcgccgtttcttcgacatcagcgaactggtcggcctgcgggtcgagcgcggcgaggtg
ttcgaggccgtgcacggcaaggtcttccagttgctcgaggacggtctgctcgatggcctgcgcatcgatcac
gtcgacggcctggccgatccgcgcggctattgccgacgcctgcgccgccgcagcgagcggatccgcgcccgt
cgcggcggcgcgccgatgctgctgtacgttgagaagatcctcggtggcgaggagcgcctgcccgaggattgg
ctgtgcgacggcaccaccggctacgacttcatgaaccaggtcagcctgttgcagcacgatccgcgcggcgaa
cgaccgttgcgcgaactctggcagcgggtcagcggacgcccggaggcgtttctcgacgaggtctaccaggct
cgccaactggtcctggcgggaagcctcgccggtgacctggagaacctcgcccagggtcttttgcgggtggcg
cgggccgacctggccagccgcgacctgaccctgggcggtatccgccgcgcgctgttccagttgctcgcgcgc
tttccggtctaccgtacctacgccggggcctgcggtcgctcggtgcaggatcgcgaggtgttccgctatgcc
gcagaggcggcccgcgaggatctcgacgaagccgaccgggcggtcctcgaccatctcgaacgctggctcggc
gggcagccgctgcgcgagctgccgcccggtccgctgcggcgcctgcgcggcgagttgctggcgcgcttccag
cagttgagttcgccgaccgccgccaaggccgtggaggataccgcctgctatcgctcggcggccctgctctcg
cgcaacgacgtcggcttcgacccgcagcgcttcgccgcttccgccgaggaattccatgccgcctgcgaagcc
aggcgcctggccagcccgcgcgccctgctggccaccgccagccatgaccacaagcgcggcgaggacgcccgc
gcccgtcttgcggcgctcagtgaactggcgccctggttcgcgcgtaacgtcgagcactggcaaagcctggcc
acgccgttacgccgcgacctcgccgaggggccggcgccgagtcccggcgacgagctgatcctgttccaggcc
ctgctcggcagttggccgctcgacgcgccttgcgacggcgccgccctggaccaagcgttcctcgtgcggatg
cgcgaatggcaatgcaaggccttgcgcgaagccaagctgcgcacgcgctggaccgcgcccgacgaagactac
gagcgcgcctgcgccgactatctggaacaactcctgcgcgcgccactggcccaggccctgcgccagtcgctg
ggcaacgcggcggcgcgactgatgccggccggggccctgaatggcctcgcccaatgcctgctgcgcctgacc
tgcccgggtatccccgatctctaccaggggcgcgaggactgggacttcagcctggtcgacccggacaaccgg
aggccggtggacttcgcccggcacgccgccgccctggccacgccgacgcccttcccggaactgctggagcac
tggcgcgacggtcgcatcaagcagaccctgatcgcccgcgtgctggggctgcggcggatgcagccgggcctg
ttccgcgacggcgactacctgcccctggaggtcagcggcgagcatgccgagcgggtcctggccttcgcccgg
cgcagtcgtcacggttgcctgctggtggtggtcccgcgcctggcctgcgccctgctcggccacgccacgcag
ccgcaggtgccggccgaggcctggggcgacacctgcctgctgctgccgccgagtctctccgaatgcacctac
agcggcctgttttccaccatgccgctgcccagcgacgggcacctgagcctgtccgaagtgctcgccgacttt
cccgtcaacctgctttaccgcctcgcccaggaggagaccccatga
Translation:
MIEPRATLRLQFHAGFTLDDALPWLDYFADLGISHLYASPLFRARPGSSHGYDVVDPTRINPELGGEPALLR
LIQGLRQRGMGLLMDIVPNHMGIGGGANPWWQDVLEWGRESPYASFFDIQWESHDAALRGQVLLPFLRSDYG
EVLAAGEIGLSLDREAGRLLASHGEQRFPLWPGSYPELLEDSGEPRLSDLAGGFRECRQDREALREMQRRLA
AALAESAPRAALERTLGKLQERHEEARQRLHRLLEAQHYRLASWRTAADDINWRRFFDISELVGLRVERGEV
FEAVHGKVFQLLEDGLLDGLRIDHVDGLADPRGYCRRLRRRSERIRARRGGAPMLLYVEKILGGEERLPEDW
LCDGTTGYDFMNQVSLLQHDPRGERPLRELWQRVSGRPEAFLDEVYQARQLVLAGSLAGDLENLAQGLLRVA
RADLASRDLTLGGIRRALFQLLARFPVYRTYAGACGRSVQDREVFRYAAEAAREDLDEADRAVLDHLERWLG
GQPLRELPPGPLRRLRGELLARFQQLSSPTAAKAVEDTACYRSAALLSRNDVGFDPQRFAASAEEFHAACEA
RRLASPRALLATASHDHKRGEDARARLAALSELAPWFARNVEHWQSLATPLRRDLAEGPAPSPGDELILFQA
LLGSWPLDAPCDGAALDQAFLVRMREWQCKALREAKLRTRWTAPDEDYERACADYLEQLLRAPLAQALRQSL
GNAAARLMPAGALNGLAQCLLRLTCPGIPDLYQGREDWDFSLVDPDNRRPVDFARHAAALATPTPFPELLEH
WRDGRIKQTLIARVLGLRRMQPGLFRDGDYLPLEVSGEHAERVLAFARRSRHGCLLVVVPRLACALLGHATQ
PQVPAEAWGDTCLLLPPSLSECTYSGLFSTMPLPSDGHLSLSEVLADFPVNLLYRLAQEETP*
AnnotationID:7343GeneID:7424
AnnotatorUID: danlee
Modification Date/Time: 2006-03-13 12:12:20
Gene Name:
Confidence Code:3
GeneProduct:probable glycosyl hydrolase
Cell Localization:()
Synonyms:PA2162
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(20) Putative enzymes
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG3280
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
gi|9948181|gb|AAG05550.1|  probable glycosyl hydrolase [Pseudomonas aeruginosa PAO1]
 gi|15597358|ref|NP_250852.1|  probable glycosyl hydrolase [Pseudomonas aeruginosa PAO1]
Length=926

 Score = 1858 bits (4814),  Expect = 0.0
 Identities = 917/926 (99%), Positives = 922/926 (99%), Gaps = 0/926 (0%)

gi|84327460|ref|ZP_00975479.1|  COG3280: Maltooligosyl trehalose synthase [Pseudomonas aeruginosa 
2192]
Length=926

 Score = 1858 bits (4813),  Expect = 0.0
 Identities = 917/926 (99%), Positives = 922/926 (99%), Gaps = 0/926 (0%)

gi|84321151|ref|ZP_00969513.1|  COG3280: Maltooligosyl trehalose synthase [Pseudomonas aeruginosa 
C3719]
Length=926

 Score = 1858 bits (4813),  Expect = 0.0
 Identities = 917/926 (99%), Positives = 922/926 (99%), Gaps = 0/926 (0%)

gi|67154108|ref|ZP_00415853.1|  Alpha amylase, catalytic subdomain [Azotobacter vinelandii AvOP]
 gi|67088241|gb|EAM07707.1|  Alpha amylase, catalytic subdomain [Azotobacter vinelandii AvOP]
Length=917

 Score = 1079 bits (2791),  Expect = 0.0
 Identities = 563/924 (60%), Positives = 650/924 (70%), Gaps = 15/924 (1%)

gi|66046226|ref|YP_236067.1|  Alpha amylase, catalytic region [Pseudomonas syringae pv. syringae 
B728a]
 gi|63256933|gb|AAY38029.1|  Alpha amylase, catalytic region [Pseudomonas syringae pv. syringae 
B728a]
Length=927

 Score = 1046 bits (2704),  Expect = 0.0
 Identities = 543/920 (59%), Positives = 642/920 (69%), Gaps = 12/920 (1%)
Structural Features:
COG3280, TreY, Maltooligosyl trehalose synthase [Carbohydrate transport and metabolism].
             CD-Length = 889 residues, 100.0% aligned
             Score =  974 bits (2518), Expect = 0.0
Genomic Context:
Comment: