ViewGene
Locus Name:
GeneID:
Location:

GeneID:7418
TrivialName: PA14_18565
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_18565
PAO1 Ortholog Locus:PA3541
Sequence Length:1494
Protein Length:497
Start: 1593867
Stop: 1592374
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
GeneID6367 (PA14_18560) replaced by GeneID7418 (PA14_18565). Homology: PA3541 [gene=alg8] [prot=alginate biosynthesis protein Alg8], Length = 494, Score = 990 bits (2560), Expect = 0.0, Identities = 493/494 (99%), Positives = 493/494 (99%)
Sequence:
atggaactgatgatggaaacttacaaacgtggcctcgccgaagccaccggctggctggtgttcctcagcctg
ctgatggtgctcgcgctggcagtgccgaagaccgtgttcgacgccgactccaaggatttcatcctgcttatc
ggcgccgtcggcatctggcgctactccatgggcggcgtgcacttcctgcgcggcatgctgttcctccacgtg
gtctacccgtactaccgccggcacgtgcgccagttgggcagcgcggccgacccgtcgcacgtgttcctgatg
gtcaccagtttccgcatcgacgccctgaccactgccatggtctatcgctcggtgatccgcgaagccatcgac
agcggctacccgaccaccgtggtctgctccatcgtcgagatgtccgacgaggtcctggtccgttctctgtgg
gagaagatgaacccgccggaccgggtcagcctcgacttcgtgcggattcccggcaccggcaagcgcgacggc
ctggcctatggcttccgcgcgatttcccggcacctgccggacgacgacgcggtggtcgcggtgatcgacggc
gacaccgtgctcgaccacggcgtggtgaagaagaccgtgccctggttcaagctcttccccaacgtcggcggc
ctcaccaccaatgaattctgcgaagtgcagggcggctacgtgatgagcgagtggcacaagctgcgcttcgcc
cagcgccacatcaacatgtgctcgatggccctgtccaagcgcgtgctgaccatgaccggacggatgtcggtg
ttccgcgcccgggtggtgaccaaccccgagttcatcaccgacgtcgagaacgaccacctggagcactggcgc
ctgggtcgcttcaagttcctcaccggtgacgacaagtccagctggttcagcctgatgcgcctgggctacgac
accttctacgtgcccgacgcggcgatcaacacggtcgagcacccgccggagaagagcttcatcaaggccagc
cgcaagctgatgtaccgctggtacggcaacaacctgcggcagaactcgcgcgcgctcaagctcggcgcgcgg
cgcctgggctggttcaccatgctggtgctgttcgaccagcgcgtctcgatgtggaccagcctgctcggcctg
gtggtggcgatcctcgccagcctcaagtacagcatcgccttcctgctggtgtacctgctctggatcggcctc
acccgcctggtgctgaccctgctcctctcgctgtccgggcaccgcatcggcccggcctatccgctgatcctc
tattacaaccagatcgtcggcgcgctggtgaagatctacgtgttcttccgcctcgaccggcagtcctggacc
cgccagccgaccaagctggagcgcggcctggccagcttccagcgctggttcaacgcctggtcgtcgcgggcc
atgaccttctctgccgccagcatcttcgtcgccgtgctgctgaccatcgtatga
Translation:
MELMMETYKRGLAEATGWLVFLSLLMVLALAVPKTVFDADSKDFILLIGAVGIWRYSMGGVHFLRGMLFLHV
VYPYYRRHVRQLGSAADPSHVFLMVTSFRIDALTTAMVYRSVIREAIDSGYPTTVVCSIVEMSDEVLVRSLW
EKMNPPDRVSLDFVRIPGTGKRDGLAYGFRAISRHLPDDDAVVAVIDGDTVLDHGVVKKTVPWFKLFPNVGG
LTTNEFCEVQGGYVMSEWHKLRFAQRHINMCSMALSKRVLTMTGRMSVFRARVVTNPEFITDVENDHLEHWR
LGRFKFLTGDDKSSWFSLMRLGYDTFYVPDAAINTVEHPPEKSFIKASRKLMYRWYGNNLRQNSRALKLGAR
RLGWFTMLVLFDQRVSMWTSLLGLVVAILASLKYSIAFLLVYLLWIGLTRLVLTLLLSLSGHRIGPAYPLIL
YYNQIVGALVKIYVFFRLDRQSWTRQPTKLERGLASFQRWFNAWSSRAMTFSAASIFVAVLLTIV*
AnnotationID:7337GeneID:7418
AnnotatorUID: danlee
Modification Date/Time: 2006-03-11 16:04:44
Gene Name:alg8
Confidence Code:1
GeneProduct:alginate biosynthesis protein Alg8
Cell Localization:()
Synonyms:PA3541
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(23) Secreted Factors (toxins, enzymes, alginate)
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):Adaptation, protection; Cell wall / LPS / capsule
EC Number:
Status:ACTIVE
Pathway:
Alginate biosynthesis
Homology:
gi|84325855|ref|ZP_00973887.1|  COG1215: Glycosyltransferases, probably involved in cell wall 
biogenesis [Pseudomonas aeruginosa 2192]
 gi|84319767|ref|ZP_00968157.1|  COG1215: Glycosyltransferases, probably involved in cell wall 
biogenesis [Pseudomonas aeruginosa C3719]
Length=497

 Score =  996 bits (2574),  Expect = 0.0
 Identities = 496/497 (99%), Positives = 496/497 (99%), Gaps = 0/497 (0%)

gi|12597974|gb|AAC36875.2|  alginate synthesis-related protein [Pseudomonas aeruginosa strain 8830]
Length=497

 Score =  994 bits (2569),  Expect = 0.0
 Identities = 495/497 (99%), Positives = 495/497 (99%), Gaps = 0/497 (0%)

gi|9949691|gb|AAG06929.1|  alginate biosynthesis protein Alg8 [Pseudomonas aeruginosa PAO1]
 gi|15598737|ref|NP_252231.1|  alginate biosynthesis protein Alg8 [Pseudomonas aeruginosa PAO1]
 gi|33300929|sp|Q52463|ALG8_PSEAE  Glycosyl transferase alg8
Length=494

 Score =  990 bits (2560),  Expect = 0.0
 Identities = 493/494 (99%), Positives = 493/494 (99%), Gaps = 0/494 (0%)
Structural Features:






   
Genomic Context:
alginate biosynthetic operon






   
Comment:
GeneID6367 (PA14_18560) replaced by GeneID7418 (PA14_18565).