ViewGene
Locus Name:
GeneID:
Location:

GeneID:7416
TrivialName: PA14_32025
AnnotatorUID:
Modification Date/Time:2006-08-22 20:08:33
LocusName:PA14_32025
PAO1 Ortholog Locus:
Sequence Length:2115
Protein Length:704
Start: 2787898
Stop: 2790012
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
GeneID6040 (PA14_32020) and GeneID6038 (PA14_32040) replaced by GID7416 (PA14_32025). Homology: 99% identity in C-terminal 704 amino acids of PA2520, czcA.
Sequence:
gtggaaggcgcggcgctggtgatcgcggtgctcttcctgttcctcggcaacatccgcgcggcgctgatcacc
gccaccatcatcccgctgtcgatgctgttcaccttcaccgggatggtcggcaacagggtcagcgccaacctg
atgagcctcggcgcgctggacttcggcatcatcgtcgacggcgccgtggtgatcgtcgagaacgccatccgc
cgcctggcccatgcccaggcccatcacggccgccagctgacccgcgcggaacgtttccacgaggtcttcgcc
gcgtccagggaggcgcgccgggcgctgatcttcggccagatcatcatcatggtggtgtacctgccgatcttc
gccctcaccggggtcgaggggaagatgttccacccgatggcgttcaccgtggtcaccgcgctgcttggcgcg
atgatcctctcggtgaccttcgtcccggcggcgatcgcgctgttcatcaccggcaaggtcaaggaggaggag
aacttcgtcatgcgccgcgcgcgtctggcctacgaaccggcgctgcgctgggtgctcggacaccgcgcgctg
gtggtcggcggtgccctcggcgcgatcctgctcaccgcgctggtggcctcgcggatgggcagcgagttcatt
cccagcctcagcgagggcgacttcgccatgcagggcctgcgggtgccgggcaccagcctgacccagtcggtc
gagatgcagcagaccctggagaagaagctgatgggcaagttcccggagatcgagcgggtcttcgcccgcacc
gggaccgccgagattgcctccgacctgatgccgccgaacgcctccgacagctacgtgatgctcaagccgcag
agccagtggccggacccgaagaagtcgcgggaggcgctgctggaagaattgcaggccgcggcccttgaggtg
ccgggcagcgtctacgagttctcccagccgatccagttgcgcttcaacgaactgatctccggggtgcgcagc
gacgtcgcggtgaaggtcttcggcgacgacatgcaggtgctcaacgacactgcggagaagatctccaaggtg
ctgcaaggcatcgacggcgcctccgaggtgaaggtcgagcagaccaccggcctgccggtgctgacggtggac
atcgaccgcgacaaggcggcacgcttcggcctcaatgtcggcgacatccaggacaccgtggccaccgccctc
ggcggacgcaacgccggtaccctgttcgagggcgaccgccgcttcgacatcgtcatccgcctgccggaaacc
ctgcgcgccgacctgccggcactgtccaacctgctgatcccgctgccgccgaacaacctggcgcggatcgac
ttcatcccgctgtcggacgtggcgcgcctcgacctctcgccgggaccgaaccagatcagccgggagaacggc
aagcggcgcatcgtggtcagcgccaacgtgcgcggccgcgacatcggctcgttcgtgctggaagcgcaacag
aagctgcaggacggggtgaagatcccggccggctactggaccacctggggcggccagttcgaacagttgcag
tccgccgccaagcgcttgcaggtagtggtgccggtggcgctgctgctggtgttcaccttgctcttcgccatg
ttcaacaacgtcaaggacggcctgctggtgttcaccggcatccccttcgccctcaccggcggggtgctggcc
ctgtggctgcgcgggataccgctgtcgatctcggcggcggtgggtttcatcgccctgtccggggtggcggtg
ctcaacggcctggtgatgatctccttcatccgcaacctgttgcaggaaggacgcagcctcgaccaggcggtg
tgggagggcgccatcacccgcctgcgtccggtgctgatgaccgccctggtggcctccctcggtttcgtgccg
atggccctggccaccggcaccggcgccgaggtgcagcggccgctggcgacggtggtgatcggcggcatcctg
tcctcgaccatgctgaccctgctggtgctgccggtgctctatcgctggacccacgggcgtgacgccggtccg
cgcgaggagacgccggcggccggctga
Translation:
MEGAALVIAVLFLFLGNIRAALITATIIPLSMLFTFTGMVGNRVSANLMSLGALDFGIIVDGAVVIVENAIR
RLAHAQAHHGRQLTRAERFHEVFAASREARRALIFGQIIIMVVYLPIFALTGVEGKMFHPMAFTVVTALLGA
MILSVTFVPAAIALFITGKVKEEENFVMRRARLAYEPALRWVLGHRALVVGGALGAILLTALVASRMGSEFI
PSLSEGDFAMQGLRVPGTSLTQSVEMQQTLEKKLMGKFPEIERVFARTGTAEIASDLMPPNASDSYVMLKPQ
SQWPDPKKSREALLEELQAAALEVPGSVYEFSQPIQLRFNELISGVRSDVAVKVFGDDMQVLNDTAEKISKV
LQGIDGASEVKVEQTTGLPVLTVDIDRDKAARFGLNVGDIQDTVATALGGRNAGTLFEGDRRFDIVIRLPET
LRADLPALSNLLIPLPPNNLARIDFIPLSDVARLDLSPGPNQISRENGKRRIVVSANVRGRDIGSFVLEAQQ
KLQDGVKIPAGYWTTWGGQFEQLQSAAKRLQVVVPVALLLVFTLLFAMFNNVKDGLLVFTGIPFALTGGVLA
LWLRGIPLSISAAVGFIALSGVAVLNGLVMISFIRNLLQEGRSLDQAVWEGAITRLRPVLMTALVASLGFVP
MALATGTGAEVQRPLATVVIGGILSSTMLTLLVLPVLYRWTHGRDAGPREETPAAG*
AnnotationID:7335GeneID:7416
AnnotatorUID: danlee
Modification Date/Time: 2006-07-03 13:01:10
Gene Name:
Confidence Code:3
GeneProduct:Possible (non-functional) C-terminal fragment of divalent metal cation efflux transporter CzcA
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(27) Transport of small molecules
Alternate Gene Product Name:CzcA C-terminus
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):Membrane proteins
EC Number:
Status:ACTIVE
Pathway:






 
Homology:
gi|9948575|gb|AAG05908.1|  RND divalent metal cation efflux transporter CzcA [Pseudomonas 
aeruginosa PAO1]
 gi|15597716|ref|NP_251210.1|  RND divalent metal cation efflux transporter CzcA [Pseudomonas 
aeruginosa PAO1]
 gi|84320749|ref|ZP_00969118.1|  COG3696: Putative silver efflux pump [Pseudomonas aeruginosa 
C3719]
Length=1051

 Score = 1342 bits (3474),  Expect = 0.0
 Identities = 700/704 (99%), Positives = 703/704 (99%), Gaps = 0/704 (0%)

gi|84326846|ref|ZP_00974870.1|  COG3696: Putative silver efflux pump [Pseudomonas aeruginosa 
2192]
Length=1051

 Score = 1342 bits (3474),  Expect = 0.0
 Identities = 700/704 (99%), Positives = 703/704 (99%), Gaps = 0/704 (0%)








 
Structural Features:
pfam00873, ACR_tran, AcrB/AcrD/AcrF family.
             CD-Length = 1017 residues, only  65.2% aligned
             Score =  586 bits (1513), Expect = 3e-168

COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].
             CD-Length = 1009 residues, only  64.7% aligned
             Score =  327 bits (841), Expect = 2e-90






   
Genomic Context:






   
Comment:
99% identity in N-terminal 323 amino acids of PA2520, czcA.  
Possible premature stop codon (unconfirmed) in the middle of the gene 
splits czcA into PA14_32015 and PA14_32025.