ViewGene
Locus Name:
GeneID:
Location:

GeneID:7415
TrivialName: PA14_32015
AnnotatorUID:
Modification Date/Time:2006-08-22 20:08:33
LocusName:PA14_32015
PAO1 Ortholog Locus:
Sequence Length:1029
Protein Length:342
Start: 2786857
Stop: 2787885
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
GeneID6042 (PA14_32010) replaced by GID7415 (PA14_32015). Homology: 99% identity in N-terminal 323 amino acids of PA2520, czcA.
Sequence:
atgttcgaacgcatcatccaattcgccatcgagcaacgctggctggtcctgctggcggtgctggggatggcc
ggggtcggcattggcagctaccagaagctgtccatcgacgcggtcccggacatcaccaacgtccaggtgcag
atcaataccgccgcccccggctactcgccgctggaagtggagcagcggatcacctacccggtggagaccgtc
atggccggcctgccgggtttgcaggaaacccgttcgctgtcgcggccggggatttcccaggtgacggtgatc
ttcgaggaaggcaccgacatctacttcgcccgccagcaggtcaacgaacgcctgagcacggcgcgcgagcaa
ctgccggaagacatctcgccgaccctcgggccgatctccaccggtctcggcgagatctacctgtggacggta
gaggccgaggagggtgcgaccaaggaggacggcagcgcctacacgcccaccgacctgcgcaccatccaggac
tggatcatccgtccgcagttgcgcaacgtgaagggcgtggccgagatcaacaccatcggcggctacgctaag
caattcctcatcgccccggatccgaagaagctcgcggcctacaagctgaccctcggcgacctgcagaacgcc
gtgctgcgcaacaacgagaacgtcggcgccggctacatcgagcggcgcggcgagcagttgctgatccgcgcg
ccgggccaggtcaaggacatggacgatatccgcgggatcatcgtttccaacgtcgacggcgtgccgatccgt
atccgcgacgtcgccgaggtcggcctgggcaaggagctgcgcaccggcgcggccaccgagaacggccgcgaa
gtggtgctcggcacggtgttcatgctgatcggcgagaacagccgggaagtggcccacgcggtctgccagcgc
ctggaggagatcaaccggaccctgcccagggggtcactgcgatcaccgtctacgaccgcaccaccctgcatg
actaggacagtgcccacgtga
Translation:
MFERIIQFAIEQRWLVLLAVLGMAGVGIGSYQKLSIDAVPDITNVQVQINTAAPGYSPLEVEQRITYPVETV
MAGLPGLQETRSLSRPGISQVTVIFEEGTDIYFARQQVNERLSTAREQLPEDISPTLGPISTGLGEIYLWTV
EAEEGATKEDGSAYTPTDLRTIQDWIIRPQLRNVKGVAEINTIGGYAKQFLIAPDPKKLAAYKLTLGDLQNA
VLRNNENVGAGYIERRGEQLLIRAPGQVKDMDDIRGIIVSNVDGVPIRIRDVAEVGLGKELRTGAATENGRE
VVLGTVFMLIGENSREVAHAVCQRLEEINRTLPRGSLRSPSTTAPPCMTRTVPT*
AnnotationID:7334GeneID:7415
AnnotatorUID: danlee
Modification Date/Time: 2006-07-03 13:01:40
Gene Name:
Confidence Code:3
GeneProduct:Possible (non-functional) N-terminal fragment of divalent metal cation efflux transporter CzcA
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(27) Transport of small molecules
Alternate Gene Product Name:CzcA N-terminus
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):Membrane proteins
EC Number:
Status:ACTIVE
Pathway:






 
Homology:
gi|9948575|gb|AAG05908.1|  RND divalent metal cation efflux transporter CzcA [Pseudomonas 
aeruginosa PAO1]
 gi|15597716|ref|NP_251210.1|  RND divalent metal cation efflux transporter CzcA [Pseudomonas 
aeruginosa PAO1]
 gi|84320749|ref|ZP_00969118.1|  COG3696: Putative silver efflux pump [Pseudomonas aeruginosa 
C3719]
Length=1051

 Score =  623 bits (1607),  Expect = 3e-177
 Identities = 320/323 (99%), Positives = 321/323 (99%), Gaps = 0/323 (0%)






 
Structural Features:
pfam00873, ACR_tran, AcrB/AcrD/AcrF family. Members of this family are integral membrane proteins. 
             CD-Length = 1017 residues, only  31.0% aligned
             Score =  322 bits (827), Expect = 4e-89






   
Genomic Context:






   
Comment:
99% identity in N-terminal 323 amino acids of PA2520, czcA.  
Possible premature stop codon (unconfirmed) in the middle of the gene 
splits czcA into PA14_32015 and PA14_32025.