ViewGene
Locus Name:
GeneID:
Location:

GeneID:7411
TrivialName: PA14_39925
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_39925
PAO1 Ortholog Locus:PA1902
Sequence Length:624
Protein Length:207
Start: 3559482
Stop: 3558859
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
GID5825 (PA14_39930) and GID5826 (PA14_39920) replaced by GID7411 (PA14_39925).
Sequence:
atgagcggcattcccgaaatcaccgcctatcccttgccgaccgcccagcagctgccggccaacctggcgcgc
tggagcctgaagccgcggcgcgcggtgctgctggtgcacgacatgcagcgctacttcctgcgcccgctgccc
gagagcctgcgcgccgggctggtggccaacgccgcgcggctgcgccgctggtgcgtcgagcagggcgtgcag
atcgcctacaccgcccagccgggcagcatgaccgaggagcagcgcggcctgctcaaggacttctgggggccg
ggcatgcgcgccagtccggccgaccgcgaggtggtcgaggagctggcgccggggccggacgactggctgctg
accaagtggcgctacagcgccttcttccactccgacctgctccagcggatgcgcgccgccggccgcgaccag
ttggtgctgtgcggcgtatacgcccacgtcggggtgctgatctccacggtcgacgcctactccaacgacatc
cagccgttcctggtggccgacgccatcgccgacttcagcgaggcgcaccaccgcatggccctggaatacgcc
gccagccgctgcgcgatggtggtcaccaccgacgaggtgctggaatga
Translation:
MSGIPEITAYPLPTAQQLPANLARWSLKPRRAVLLVHDMQRYFLRPLPESLRAGLVANAARLRRWCVEQGVQ
IAYTAQPGSMTEEQRGLLKDFWGPGMRASPADREVVEELAPGPDDWLLTKWRYSAFFHSDLLQRMRAAGRDQ
LVLCGVYAHVGVLISTVDAYSNDIQPFLVADAIADFSEAHHRMALEYAASRCAMVVTTDEVLE*
AnnotationID:7329GeneID:7411
AnnotatorUID: danlee
Modification Date/Time: 2006-03-10 16:04:18
Gene Name:phzD2
Confidence Code:1
GeneProduct:phenazine biosynthesis protein PhzD
Cell Localization:()
Synonyms:PA1902
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(23) Secreted Factors (toxins, enzymes, alginate)
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:cd01013, COG1535, pfam00857
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Phenazine biosynthesis
Homology:
gi|2232286|gb|AAC64487.1|  PhzD [Pseudomonas aeruginosa]
 gi|9950426|gb|AAG07600.1|  phenazine biosynthesis protein PhzD [Pseudomonas aeruginosa PAO1]
 gi|9947895|gb|AAG05291.1|  phenazine biosynthesis protein PhzD [Pseudomonas aeruginosa PAO1]
 gi|15599408|ref|NP_252902.1|  phenazine biosynthesis protein PhzD [Pseudomonas aeruginosa PAO1]
 gi|15597099|ref|NP_250593.1|  phenazine biosynthesis protein PhzD [Pseudomonas aeruginosa PAO1]
 gi|32039424|ref|ZP_00137696.1|  COG1535: Isochorismate hydrolase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|33357449|pdb|1NF9|A  Chain A, Crystal Structure Of Phzd Protein From Pseudomonas Aeruginosa
 gi|84327739|ref|ZP_00975755.1|  COG1535: Isochorismate hydrolase [Pseudomonas aeruginosa 2192]
 gi|84321368|ref|ZP_00969726.1|  COG1535: Isochorismate hydrolase [Pseudomonas aeruginosa C3719]
 gi|84319008|ref|ZP_00967416.1|  COG1535: Isochorismate hydrolase [Pseudomonas aeruginosa C3719]
Length=207

 Score =  419 bits (1076),  Expect = 4e-116
 Identities = 206/207 (99%), Positives = 207/207 (100%), Gaps = 0/207 (0%)
Structural Features:
cd01013, isochorismatase, Isochorismatase, also known as 2,3 dihydro-2,3 dihydroxybenzoate synthase.
             CD-Length = 203 residues, 100.0% aligned
             Score =  330 bits (848), Expect = 7e-92

COG1535, EntB, Isochorismate hydrolase [Secondary metabolites biosynthesis, 
transport, and catabolism].
             CD-Length = 218 residues,  95.4% aligned
             Score =  316 bits (811), Expect = 1e-87

pfam00857, Isochorismatase, Isochorismatase family. This family are hydrolase enzymes..
             CD-Length = 183 residues, 100.0% aligned
             Score =  224 bits (572), Expect = 6e-60
Genomic Context:
Operon phzA2B2C2D2E2F2G2
Comment: