ViewGene
Locus Name:
GeneID:
Location:

GeneID:7410
TrivialName: PA14_39945
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_39945
PAO1 Ortholog Locus:PA1901
Sequence Length:1218
Protein Length:405
Start: 3560696
Stop: 3559479
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
GID5823 (PA14_39950) and GID5824 (PA14_39940) replaced by GID7410 (PA14_39945). Homology: PA1901 [gene=phzC2] [prot=phenazine biosynthesis protein PhzC], Length = 405, Score = 814 bits (2103), Expect = 0.0, Identities = 404/405 (99%), Positives = 405/405 (99%)
Sequence:
atggacgatctattgcaacgcgtacggcgctgcgaagcgctgcagcaacccgaatggggcgatccgtcgcgc
ctgcgcgacgtgcaggcgtacctgcgcggcagtccggcgctgatccgcgccggcgacatcctggccctgcgc
gcgaccctggcgcgggtcgcccgcggcgaggcgctggtggtgcagtgcggcgactgcgccgaggacatggac
gaccaccatgccgagaacgtggcgcgcaaggccgccgtgctggaactgctggccggcgccctgcgcctggcc
ggccggcgaccggtgatccgcgtcgggcgcatcgccgggcagtacgccaagccgcgttccaagccgcacgag
caggtcggcgagcagaccctgccggtctatcgcggcgacatggtcaacggccgcgaggcccatgccgagcag
cgccgggccgatccgcagcggatcctcaagggctatgcggcggcgcgcaacatcatgcgccacctgggctgg
gacgccgcgtccgggcaggaggcgaatgcctcgccggtctggaccagccacgagatgctgctgctcgactac
gagctgtcgatgctgcgcgaggacgagcagcgccgggtctacctcggttcgacccactggccgtggatcggc
gagcgcacccgccaggtcgacggcgcccatgtggcgctgctggccgaggtgctcaacccggtggcctgcaag
gtcggtccggagatcggccgcgaccagttgctggcgctctgcgagcgcctcgatccgcgccgcgagccggga
cgcctgacgctgatcgcgcggatgggcgcgcagaaggtcggcgagcgcctgccaccgctggtggaggcggtg
cgcgcggccgggcacccggtgatctggctgagcgacccgatgcacggcaacaccatcgtcgcgccctgcggc
aacaagacccgcctggtgcgcagcatcgccgaggaggtggcggcgttccgcctggcggtgtccggctccggc
ggcgtggccgccgggctgcacctggagaccaccccggacgacgtcaccgagtgcgtcgccgattccagcggc
ctgcaccaggtcagccggcactacaccagcctctgcgatccgcggctgaacccctggcaggcgctcagcgcg
gtgatggcctgggccggcgcagaagcgatcccgagcgcaaccttccccctggagaccgtggcatga
Translation:
MDDLLQRVRRCEALQQPEWGDPSRLRDVQAYLRGSPALIRAGDILALRATLARVARGEALVVQCGDCAEDMD
DHHAENVARKAAVLELLAGALRLAGRRPVIRVGRIAGQYAKPRSKPHEQVGEQTLPVYRGDMVNGREAHAEQ
RRADPQRILKGYAAARNIMRHLGWDAASGQEANASPVWTSHEMLLLDYELSMLREDEQRRVYLGSTHWPWIG
ERTRQVDGAHVALLAEVLNPVACKVGPEIGRDQLLALCERLDPRREPGRLTLIARMGAQKVGERLPPLVEAV
RAAGHPVIWLSDPMHGNTIVAPCGNKTRLVRSIAEEVAAFRLAVSGSGGVAAGLHLETTPDDVTECVADSSG
LHQVSRHYTSLCDPRLNPWQALSAVMAWAGAEAIPSATFPLETVA*
AnnotationID:7328GeneID:7410
AnnotatorUID: danlee
Modification Date/Time: 2006-03-10 16:04:04
Gene Name:phzC2
Confidence Code:1
GeneProduct:phenazine biosynthesis protein PhzC
Cell Localization:(1) Cytoplasmic
Synonyms:PA1901
Cell Localization Confidence Code:3
MolecularFunction:
Functional Category:(23) Secreted Factors (toxins, enzymes, alginate)
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:pfam01474
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Phenazine biosynthesis
Homology:
gi|2979521|gb|AAC64491.1|  PhzC [Pseudomonas aeruginosa]
 gi|9950425|gb|AAG07599.1|  phenazine biosynthesis protein PhzC [Pseudomonas aeruginosa PAO1]
 gi|9947894|gb|AAG05290.1|  phenazine biosynthesis protein PhzC [Pseudomonas aeruginosa PAO1]
 gi|15599407|ref|NP_252901.1|  phenazine biosynthesis protein PhzC [Pseudomonas aeruginosa PAO1]
 gi|15597098|ref|NP_250592.1|  phenazine biosynthesis protein PhzC [Pseudomonas aeruginosa PAO1]
 gi|84327738|ref|ZP_00975754.1|  COG3200: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
[Pseudomonas aeruginosa 2192]
 gi|84321367|ref|ZP_00969725.1|  COG3200: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
[Pseudomonas aeruginosa C3719]
 gi|84319007|ref|ZP_00967415.1|  COG3200: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
[Pseudomonas aeruginosa C3719]
Length=405

 Score =  814 bits (2103),  Expect = 0.0
 Identities = 404/405 (99%), Positives = 405/405 (100%), Gaps = 0/405 (0%)
Structural Features:
pfam01474, DAHP_synth_2, Class-II DAHP synthetase family. Members of this family are aldolase 
enzymes that catalyse the first step of the shikimate pathway..
             CD-Length = 422 residues, 100.0% aligned
             Score =  494 bits (1272), Expect = 1e-140
Genomic Context:
Operon phzA2B2C2D2E2F2G2 from P. aeruginosa PAO1 is experimentally demonstrated to function in PCA biosynthesi
Comment:
GID5823 (PA14_39950) and GID5824 (PA14_39940) replaced by GID7410 (PA14_39945).