ViewGene

Locus Name:
GeneID:
Location:

GeneID:7409
TrivialName: PA14_41575
AnnotatorUID: danlee
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_41575
PAO1 Ortholog Locus:PA1776
Sequence Length:591
Protein Length:196
Start: 3714198
Stop: 3713608
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Replaces GID5786 (PA14_41580).
Sequence:
ttgaataagcctcaccccctgtcacagcggtatgacccacgccagctttccgatgaagagctggtcgagcgt
gcgcactcggagctgttccacgtgacgcgcgcctatgaagaattgatgcggcgttaccagcgcacgctgttc
aacgtctgtgcccgctacctgggcaacgaccgcgacgcggacgacgtgtgccaggaggtgatgctgaaagtt
ttgtacgggttgaagaactttgagggcaagtcgaagttcaaaacatggctatatagcatcacgtacaacgag
tgcatcacgcagtaccgcaaggagcgccgcaagcgccgattgatggatgcgctcagcctcgacccgctggag
gaggcttccgaggagaagtcgccgaaggttgaggagcggggcggattggatcgttggctcgtccatgtcaat
ccgatagatcgggagattctggttcttcgcttcgtagcggaactggagtttcaggagatagcggatatcatg
cacatgggtctgagtgcgacgaaaatgcgctacaagcgggcactggaccgcctgcgcgaaaagttttcagat
gcgaccgaaacatag
Translation:
MNKPHPLSQRYDPRQLSDEELVERAHSELFHVTRAYEELMRRYQRTLFNVCARYLGNDRDADDVCQEVMLKV
LYGLKNFEGKSKFKTWLYSITYNECITQYRKERRKRRLMDALSLDPLEEASEEKSPKVEERGGLDRWLVHVN
PIDREILVLRFVAELEFQEIADIMHMGLSATKMRYKRALDRLREKFSDATET*
AnnotationID:7327GeneID:7409
AnnotatorUID: danlee
Modification Date/Time: 2006-03-10 15:03:24
Gene Name:sigX
Confidence Code:1
GeneProduct:ECF sigma factor SigX
Cell Localization:(1) Cytoplasmic
Synonyms:PA1776
Cell Localization Confidence Code:3
MolecularFunction:
Functional Category:(25) Transcriptional regulators
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG1595
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
gi|4186418|gb|AAD11567.1|  putative ECF sigma factor X [Pseudomonas aeruginosa]
Length=196

 Score =  397 bits (1020),  Expect = 1e-109
 Identities = 196/196 (100%), Positives = 196/196 (100%), Gaps = 0/196 (0%)
Structural Features:
COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
[Transcription].
             CD-Length = 182 residues,  92.3% aligned
             Score =  110 bits (275), Expect = 1e-25
Genomic Context:
Comment:
Replaces GID5786 (PA14_41580).  
Identical to gi|4186418|gb|AAD11567.1|, which is the updated version of PAO1 PA1776.  
Only partially identical to the currently listed version of PA1776.