ViewGene
Locus Name:
GeneID:
Location:

GeneID:7404
TrivialName: PA14_51205
AnnotatorUID: danlee
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_51205
PAO1 Ortholog Locus:PA1015
Sequence Length:801
Protein Length:266
Start: 4550803
Stop: 4551603
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Replaces GID3115 (PA14_51210). Homology: PA1015 [gene=PA1015] [prot=probable transcriptional regulator], Length = 266, Score = 520 bits (1339), Expect = e-149, Identities = 266/266 (100%), Positives = 266/266 (100%)
Sequence:
atgaccaaggacgccacaaccaaaggcaccagcagcaaagatgtcggcgcggtagtgaacgccattcagata
cttcgccacctagcccacgccgacggaccgcaaggcgtggccgccatcgctcgcgccaccggcatcagcccg
agcagcgccttcaatatcctgcgcaccctgagcaacgaacggctgacctccttcgacgatgcgggcaagacc
taccaactgggccttggcctgtcggaactggccgtaggattcgtcggacgcagctatgccgacctgatccag
ccagagctggagcgactgagccttgcccaccacatcctcatcgccctgtggcaagtcaccgacgatgcgcac
atccgcgtcatcgcccttgccgcaccgcccgtcgcccacgtcaacgtcgccgtcggcacgcgcctgccggaa
ctggtcggcgccgccgggcgttgcattgccggcctgcgcgaactgccggaggacgaactgcgccgccgactg
acccgcgtgcgctgggaaaatccgccgagcttcgagcgctaccaggccgaagcgaccgaggccgtcgagcgc
ggctgggctatcgaccaggaacacctctaccgcggcgtgagcatggtcgccagcgccatcaccgaccgcgac
ggacaaccgcgcttcgccatctccgcgatcggcatcagcgcccagcaccagcccgacgacctggaacggatc
ggcaccagcctgcgggataccgcgcgcttcgtgagccgcgcgctatttccccagggcgaggcactgaaggag
aaatcctga
Translation:
MTKDATTKGTSSKDVGAVVNAIQILRHLAHADGPQGVAAIARATGISPSSAFNILRTLSNERLTSFDDAGKT
YQLGLGLSELAVGFVGRSYADLIQPELERLSLAHHILIALWQVTDDAHIRVIALAAPPVAHVNVAVGTRLPE
LVGAAGRCIAGLRELPEDELRRRLTRVRWENPPSFERYQAEATEAVERGWAIDQEHLYRGVSMVASAITDRD
GQPRFAISAIGISAQHQPDDLERIGTSLRDTARFVSRALFPQGEALKEKS*
AnnotationID:7322GeneID:7404
AnnotatorUID: danlee
Modification Date/Time: 2006-03-10 13:01:41
Gene Name:
Confidence Code:3
GeneProduct:probable transcriptional regulator
Cell Localization:(1) Cytoplasmic
Synonyms:PA1015
Cell Localization Confidence Code:3
MolecularFunction:
Functional Category:(25) Transcriptional regulators
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG1414
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:
gi|84316500|ref|ZP_00964974.1|  COG1414: Transcriptional regulator [Pseudomonas aeruginosa C3719]
Length=266

 Score =  518 bits (1333),  Expect = 1e-145
 Identities = 265/266 (99%), Positives = 265/266 (99%), Gaps = 0/266 (0%)

gi|84322587|ref|ZP_00970672.1|  COG1414: Transcriptional regulator [Pseudomonas aeruginosa 2192]
Length=266

 Score =  512 bits (1319),  Expect = 5e-144
 Identities = 263/266 (98%), Positives = 263/266 (98%), Gaps = 0/266 (0%)








 
Structural Features:
COG1414, IclR, Transcriptional regulator [Transcription].
             CD-Length = 246 residues, 100.0% aligned
             Score =  131 bits (331), Expect = 9e-32






   
Genomic Context:






   
Comment: