ViewGene
Locus Name:
GeneID:
Location:

GeneID:7392
TrivialName: PA14_24675
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_24675
PAO1 Ortholog Locus:
Sequence Length:1032
Protein Length:343
Start: 2156561
Stop: 2157592
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Replaces PA14_24680 (Gene ID 6242). A possible (BUT UNCONFIRMED) frame-shift due to additional G at position 2156197 (ccaggccgGccgttgtgga). Frame shift splits PAO1 PA3048 into two PA14 ORFS: PA14_24665 (GeneID 7391) and PA14_24675(GeneID 7392). Removal of this additional G would result in a single PA14 ORF that aligns with PAO1 PA3048: 720/725 (99%) Identity; 723/725 (99%) Similarity.
Sequence:
atgatccaggtcgagccgcgccagttcgtcaccggcgagcgtggcgaacgcaacgacgaaggtctggcgcgg
gcgccgagcgagccggcacggctgagcgagggcgggcagatgttcgccaatcgcctgcagaagaacctccgg
caactgggcaaatgggcgcgccgcgacaagatcgagtgctatcgcctgtatgacgccgatatgccggagtat
gccctggcggtggatatctacggcgattgggttcacgtccaggagtacgccgcgcccaagtcgatcgatccg
gcaaaagcccaggcgcgcctgttcgacgccctggcggcgattccgcagaccctgggcgttgcccaggagcgg
gtggtggtcaagcgccgcgagcgccaggccggcaagaagcagtacgaacggcagagcagcgagggcaagttc
ctcgaggtgggcgagggcgatgtgcgcctgctggtgaacctgaccgattacctggataccgggctgttcctc
gatcaccggccgatgcgcctgcgcatccagaaggaggcggccggcaagcgcttcctcaacctgttctgctat
accgccacggccaccgtgcatgcggccaggggcggcgcgcgcagcaccaccagcgtcgacctgtcgaagacc
tacctggactgggcgcggcgcaacctgtcgctcaacggcttttccgacaagcagcgcctggtgcacggcgac
gtgatggagtggttgcgggaagacgatggccagtacgaactgatcttcatcgacccgccgaccttctccaac
tccaagcgtatggaaggcgtgttcgacgtgcagcgcgaccacgtcgaactgctcgacctggccatggcgcgg
ctggcgccgggcggggtgctgtatttctccaacaacttccgcaagttcgaactggacgagagcgtgcaggcc
cgctatgcggtcgaagagatcactggcgaaaccctcgatccggatttcgcgcgtaatccgaagatccatcgg
gcctggagaatcaccgttcgctga
Translation:
MIQVEPRQFVTGERGERNDEGLARAPSEPARLSEGGQMFANRLQKNLRQLGKWARRDKIECYRLYDADMPEY
ALAVDIYGDWVHVQEYAAPKSIDPAKAQARLFDALAAIPQTLGVAQERVVVKRRERQAGKKQYERQSSEGKF
LEVGEGDVRLLVNLTDYLDTGLFLDHRPMRLRIQKEAAGKRFLNLFCYTATATVHAARGGARSTTSVDLSKT
YLDWARRNLSLNGFSDKQRLVHGDVMEWLREDDGQYELIFIDPPTFSNSKRMEGVFDVQRDHVELLDLAMAR
LAPGGVLYFSNNFRKFELDESVQARYAVEEITGETLDPDFARNPKIHRAWRITVR*
AnnotationID:7304GeneID:7392
AnnotatorUID: danlee
Modification Date/Time: 2006-02-07 15:03:02
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG1092
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:
gi|15598244|ref|NP_251738.1|  hypothetical protein PA3048 [Pseudomonas aeruginosa PAO1]
Length=725

 Score =  690 bits (1780),  Expect = 0.0
 Identities = 343/343 (100%), Positives = 343/343 (100%), Gaps = 0/343 (0%)

gi|84326295|ref|ZP_00974323.1|  COG0116: Predicted N6-adenine-specific DNA methylase [Pseudomonas 
aeruginosa 2192]
Length=719

 Score =  690 bits (1780),  Expect = 0.0
 Identities = 343/343 (100%), Positives = 343/343 (100%), Gaps = 0/343 (0%)

gi|84320214|ref|ZP_00968598.1|  COG1092: Predicted SAM-dependent methyltransferases [Pseudomonas 
aeruginosa C3719]
Length=413

 Score =  690 bits (1780),  Expect = 0.0
 Identities = 343/343 (100%), Positives = 343/343 (100%), Gaps = 0/343 (0%)






 
Structural Features:
COG1092, Predicted SAM-dependent methyltransferases [General function prediction only].
             CD-Length = 393 residues,  85.0% aligned
             Score =  297 bits (761), Expect = 2e-81






   
Genomic Context:






   
Comment:
Replaces PA14_24680  (GeneID 6242).
A possible (BUT UNCONFIRMED) frame-shift due to additional G at position 2156197 (ccaggccgGccgttgtgga).
Frame shift splits PAO1 PA3048 into two PA14 ORFS: PA14_24665 (GeneID 7391) and PA14_24675(GeneID 7392).