ViewGene
Locus Name:
GeneID:
Location:

GeneID:7391
TrivialName: PA14_24665
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_24665
PAO1 Ortholog Locus:
Sequence Length:1104
Protein Length:367
Start: 2155414
Stop: 2156517
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Replaces PA14_24660 (GeneID 6243). A possible (BUT UNCONFIRMED) frame-shift due to additional G at position 2156197 (ccaggccgGccgttgtgga). Frame shift splits PAO1 PA3048 into two PA14 ORFS: PA14_24665 (GeneID 7391) and PA14_24675(GeneID 7392). Removal of this additional G would result in a single PA14 ORF that aligns with PAO1 PA3048: 720/725 (99%) Identity; 723/725 (99%) Similarity.
Sequence:
atggctgatgtttacgaattgtttctgacctgcccgaaaggcctggaaagcctgctcctcgaagaggcgcag
gggctcggcctggacgaggcgcgcgcccaggtgtcggcggtgcgcgggcagggcagcctggaggtggcctat
cgcctctgcctgtggtcgcgcctggccaaccgggtcttgctggtgctggcgcgattcccggtggagaacgcc
gagtccatgtacatggcggtccacgcggtgaactgggaagaccacctggacgccggcggcacgctggcggtg
gagttcagcggcaagggctcgggcatcgacaacacccatttcggggcgctgaaggtcaaggatgcgatcgtc
gacaacctgcgcgagcgctccggccgacgtccgtcggtggacaaggtcaatccggacgtgcgcgtccacctg
cacctcgaccgcggccaggcgaccctttccctggacctctccgggcatagcctgcaccagcgcggctatcgt
ctgcagcagggcgccgcgccgctgaaggagaacctggcggcggcggtgttgatccgtgccggctggccgaag
atcgccgccgagggcggtgccctggccgacccgatgtgtggcgtcggcaccttcctggtcgaggcggcgctg
atggctgcccatatcgcgccgaacctcaggcgcgagcgctggggcttcagcaattggctggggcacgtgccg
gcgctgtggcgccagctccacgaggaagcccagcagcgcgcggcggccggcctggccaggccggccgttgtg
gattcgcggctacgaggccgacccgcgcctgatccagccggcgcgcaacaatatcgagcgtgccggagtggc
cgactgggtgaagatctaccagggcgaactggcgactttcgagccgcgcccggacaagggccagaccggcct
ggtgatctgcaacccgccctatggcgagcgcctcggcgacgaagccagcctgctgtatctctaccagaacct
cggcgagcgcctgcgccagagctgcatcggctggagcgccggggtgttcaccggggcgccggaactgggcaa
gcgcatgggtatccgcagccataa
Translation:
MADVYELFLTCPKGLESLLLEEAQGLGLDEARAQVSAVRGQGSLEVAYRLCLWSRLANRVLLVLARFPVENA
ESMYMAVHAVNWEDHLDAGGTLAVEFSGKGSGIDNTHFGALKVKDAIVDNLRERSGRRPSVDKVNPDVRVHL
HLDRGQATLSLDLSGHSLHQRGYRLQQGAAPLKENLAAAVLIRAGWPKIAAEGGALADPMCGVGTFLVEAAL
MAAHIAPNLRRERWGFSNWLGHVPALWRQLHEEAQQRAAAGLARPAVVDSRLRGRPAPDPAGAQQYRACRSG
RLGEDLPGRTGDFRAAPGQGPDRPGDLQPALWRAPRRRSQPAVSLPEPRRAPAPELHRLERRGVHRGAGTGQ
AHGYPQP*
AnnotationID:7303GeneID:7391
AnnotatorUID: danlee
Modification Date/Time: 2006-02-07 15:03:45
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG0116
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:
gi|84320215|ref|ZP_00968599.1|  COG0116: Predicted N6-adenine-specific DNA methylase [Pseudomonas 
aeruginosa C3719]
Length=361

 Score =  651 bits (1680),  Expect = 0.0
 Identities = 334/366 (91%), Positives = 339/366 (92%), Gaps = 10/366 (2%)

gi|9949153|gb|AAG06436.1|  conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|15598244|ref|NP_251738.1|  hypothetical protein PA3048 [Pseudomonas aeruginosa PAO1]
Length=725

 Score =  516 bits (1329),  Expect = 5e-145
 Identities = 257/261 (98%), Positives = 260/261 (99%), Gaps = 0/261 (0%)

gi|84326295|ref|ZP_00974323.1|  COG0116: Predicted N6-adenine-specific DNA methylase [Pseudomonas 
aeruginosa 2192]
Length=719

 Score =  505 bits (1301),  Expect = 9e-142
 Identities = 268/320 (83%), Positives = 275/320 (85%), Gaps = 13/320 (4%)






 
Structural Features:
COG0116, Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair].
             CD-Length = 381 residues, only  69.6% aligned
             Score =  279 bits (716), Expect = 3e-76






   
Genomic Context:






   
Comment:
A possible (BUT UNCONFIRMED) frame-shift due to additional G at position 2156197 (ccaggccgGccgttgtgga).
Frame shift splits PAO1 PA3048 into two PA14 ORFS: PA14_24665 (GeneID 7391) and PA14_24675(GeneID 7392).
Removal of this additional G would result in