ViewGene

Locus Name:
GeneID:
Location:

GeneID:7375
TrivialName: PA14_25305
AnnotatorUID: danlee
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_25305
PAO1 Ortholog Locus:PA2998
Sequence Length:1212
Protein Length:403
Start: 2213186
Stop: 2214397
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Replaces PA14_25300 (GeneID 2060) and PA14_25310 (GeneID 6229). Homology: PA2998 [gene=nqrB] [prot=Na+-translocating NADH:ubiquinone oxidoreductase subunit Nrq2] Length = 403 Score = 821 bits (2120), Expect = 0.0 Identities = 403/403 (100%), Positives = 403/403 (100%)
Sequence:
atgggtttgcgtaacctgctcgacaaggtcgagcatcatttcgagaagggcgggcgctacgagaagtggtac
ccgctgtacgaagccgtggacaccttcctctatcgtcccggcagcgtcacccgcaccactgcacacgtgcgc
gacggcatcgacctgaagcgcatgatgatcatcgtctggctgtgcaccttcccggcgatgttctttggcatg
tacaacgtcggccaccaggccaacctgatcttcgcccagagccccgacctgttgagcgcccaggatggctgg
cgcttcgccctgatcggcgcgctggccgggttcgacccgaacagcctgtgggattgcctggtccagggcgcc
gcgtacttcctgccggtgtacctgaccaccttcatcgtcggcggtttctgggaggtgctgttcgccagcatc
cgccgccacgaggtcaacgaaggcttcttcgtcacctcggtgctgttcgccctgaccctgccgccgtccgtc
ccgctgtggcaggtagccctggggatcagcttcggcgtggtgctgggcaaggaagtgttcggcggcaccggg
aagaacttcctcaatccggcactggtcggccgggccttcctgttcttcgcctacccggcgcagatgtccggc
gacgcggtatggacctcggtggacggcttcgccggcgccacctcgctgagcctggccgccgccggcggggtg
gacaacatcctcggccacggcctgacctggatggatgccttcctcggccacatgcagggttcgatgggcgag
accagcaccctggcgatcttcatcggcggcgccgtgctgctgctgacccgcatcgcctcctggcgcatcgtc
gccggggtgatgctggggatggtcgccatgagctacctgttcaacgccatcggctcggccagcaacccgatg
ttcgccatgccctggtattggcacctggtcaccggcggcttcgcctttggcatgatcttcatggccaccgac
ccggtctcggcgtccatgaccgataccggcaagtggctgttcggtgccctgatcggagtgatggtcatgctg
atccgggtggtcaacccggcgttcccggaaggcatgatgctggcgatcctgttcgccaacctgttcgcaccg
ctgatcgaccatttcgtcgttcaggccaacatcaagcggaggctggcgcgcaatggctaa
Translation:
MGLRNLLDKVEHHFEKGGRYEKWYPLYEAVDTFLYRPGSVTRTTAHVRDGIDLKRMMIIVWLCTFPAMFFGM
YNVGHQANLIFAQSPDLLSAQDGWRFALIGALAGFDPNSLWDCLVQGAAYFLPVYLTTFIVGGFWEVLFASI
RRHEVNEGFFVTSVLFALTLPPSVPLWQVALGISFGVVLGKEVFGGTGKNFLNPALVGRAFLFFAYPAQMSG
DAVWTSVDGFAGATSLSLAAAGGVDNILGHGLTWMDAFLGHMQGSMGETSTLAIFIGGAVLLLTRIASWRIV
AGVMLGMVAMSYLFNAIGSASNPMFAMPWYWHLVTGGFAFGMIFMATDPVSASMTDTGKWLFGALIGVMVML
IRVVNPAFPEGMMLAILFANLFAPLIDHFVVQANIKRRLARNG*
AnnotationID:7288GeneID:7375
AnnotatorUID: danlee
Modification Date/Time: 2006-02-01 12:12:52
Gene Name:nqrB
Confidence Code:2
GeneProduct:Na+-translocating NADH:ubiquinone oxidoreductase subunit Nrq2
Cell Localization:()
Synonyms:PA2998
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(12) Energy metabolism
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG1805, pfam03116
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
gi|9949098|gb|AAG06386.1|  Na+-translocating NADH:ubiquinone oxidoreductase subunit Nrq2 
[Pseudomonas aeruginosa PAO1]
 gi|15598194|ref|NP_251688.1|  Na(+)-translocating NADH-quinone reductase subunit B [Pseudomonas 
aeruginosa PAO1]
 gi|84326243|ref|ZP_00974271.1|  COG1805: Na+-transporting NADH:ubiquinone oxidoreductase, subunit 
NqrB [Pseudomonas aeruginosa 2192]
 gi|84320164|ref|ZP_00968548.1|  COG1805: Na+-transporting NADH:ubiquinone oxidoreductase, subunit 
NqrB [Pseudomonas aeruginosa C3719]
 gi|15214109|sp|Q9HZK7|NQRB_PSEAE  Na(+)-translocating NADH-quinone reductase subunit B (Na(+)-translocating 
NQR subunit B) (Na(+)-NQR subunit B) (NQR complex 
subunit B) (NQR-1 subunit B)
Length=403

 Score =  821 bits (2120),  Expect = 0.0
 Identities = 403/403 (100%), Positives = 403/403 (100%), Gaps = 0/403 (0%)
Structural Features:
COG1805, NqrB, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB [Energy production 
and conversion].
             CD-Length = 400 residues, 100.0% aligned
             Score =  492 bits (1268), Expect = 3e-140

pfam03116, NQR2_RnfD_RnfE, NQR2, RnfD, RnfE family. 
             CD-Length = 342 residues, 100.0% aligned
             Score =  284 bits (729), Expect = 1e-77
Genomic Context:
6-gene cluster identical in gene order to that of V. alginolyticus
Comment: