ViewGene
Locus Name:
GeneID:
Location:

GeneID:7360
TrivialName: PA14_22075
AnnotatorUID: danlee
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_22075
PAO1 Ortholog Locus:
Sequence Length:633
Protein Length:210
Start: 1919495
Stop: 1918863
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
atgcgccacgaagaccacctcggcaatcgcggcctgctcaagcccggcggcgtacagtggatgaccgccgcc
cacggcatcatccacagcgagatgccggaacaggtggaaggcgcgatgcgtggcttccagctgtgggtcaac
ctgccggcgaagaacaagctggccccagccggctatcgcgatatcgagccggaagacgtgccacgcctggaa
accgccggaggcgtgaaggtcacggtgatcgccggtcgcttcgacgacggccaggcgcagcagatcggcgcc
gtggaaaggccggacaccgagccgcactactacgacctgcaactgcctgccggcggccgcatcgccccgcgc
ctgccggacggccatcgcgtgctgctgtacgtctacgaaggcagcctgacggtggaaggcgaacgcccggtg
gaaatcgccaccaatcgcctggctcggctgtccgaagaaggggaactgagcctgcgcagcgaagccggcgcc
cgggtactggtgctcgccggcaagccgttgcgcgagccgatcgtccagtacggtccgttcgtgatgaacagc
cgcgaggaaatcgagcaggcgctacgcgactatcgcgacggtgtcctggccgtctga
Translation:
MRHEDHLGNRGLLKPGGVQWMTAAHGIIHSEMPEQVEGAMRGFQLWVNLPAKNKLAPAGYRDIEPEDVPRLE
TAGGVKVTVIAGRFDDGQAQQIGAVERPDTEPHYYDLQLPAGGRIAPRLPDGHRVLLYVYEGSLTVEGERPV
EIATNRLARLSEEGELSLRSEAGARVLVLAGKPLREPIVQYGPFVMNSREEIEQALRDYRDGVLAV*
AnnotationID:7251GeneID:7360
AnnotatorUID: danlee
Modification Date/Time: 2005-10-17 12:12:25
Gene Name:
Confidence Code:3
GeneProduct:putative pirin-related protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG1741
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:
gi|15598436|ref|NP_251930.1|  hypothetical protein PA3240 [Pseudomonas aeruginosa PAO1]
gi|9949363|gb|AAG06628.1|  conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|11347995|pir||B83239  conserved hypothetical protein PA3240 [imported] - Pseudomonas aeruginosa (strain PAO1)
gi|14195577|sp|Q9HZ00|YW40_PSEAE  Hypothetical protein PA3240
     Length=285
     Score =  422 bits (1086),  Expect = 3e-117
     Identities = 209/210 (99%), Positives = 209/210 (99%), Gaps = 0/210 (0%)

gi|28871012|ref|NP_793631.1|  hypothetical protein PSPTO3859 [Pseudomonas syringae pv. tomato str. DC3000]
gi|28854261|gb|AAO57326.1|  conserved hypothetical protein [Pseudomonas syringae pv. tomato str. DC3000]
     Length=284
     Score =  303 bits (775),  Expect = 3e-81
     Identities = 145/205 (70%), Positives = 171/205 (83%), Gaps = 1/205 (0%)

gi|71733619|ref|YP_273863.1|  pirin [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71554172|gb|AAZ33383.1|  pirin [Pseudomonas syringae pv. phaseolicola 1448A]
     Length=284
     Score =  296 bits (758),  Expect = 3e-79
     Identities = 141/205 (68%), Positives = 168/205 (81%), Gaps = 1/205 (0%)






 
Structural Features:
COG1741, Pirin-related protein [General function prediction only].
             CD-Length = 276 residues, only  71.7% aligned
             Score =  173 bits (440), Expect = 1e-44

pfam05726, Pirin_C, Pirin C-terminal region. This region is found the C-terminal half of the Pirin protein.
             CD-Length = 103 residues,  97.1% aligned
             Score =  100 bits (251), Expect = 1e-22






   
Genomic Context:






   
Comment:
PAO1 PA3240 is split into two PA14 ORFs: PA14_22280 (GeneID 6297) is 100% identical to the first 72 amino acids
of PA3240, and PA14_22071 (GeneID 7360) is 99% identical to the last 210 aa of PA3240.  These PA14 ORFs border a 
PA14-specific insertion.