ViewGene
Locus Name:
GeneID:
Location:

GeneID:7357
TrivialName: PA14_44311
AnnotatorUID: danlee
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_44311
PAO1 Ortholog Locus:
Sequence Length:1158
Protein Length:385
Start: 3946336
Stop: 3945179
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
This GeneID combines PA1559 and PA1560 into a single ORF. PA1560 (GeneID 4610) inactivated.
Sequence:
atgaacatgcatgccgacggtgagcagatcaccgctatcgatacccgcgaacgcatcctgctgacgggggcc
accggctttctcggcggttcggtctccgcccagctgatcgccgccgggcacggcgccaacctgtccttcctg
gtccgcgccgaatcccgccagcaggggctcgaacgcctgcgcggcaacctgctgatgcatggcgtcgacgaa
accgactgcctggcactgcgggcggagcagatcctctgcggcgatttcctcgacacctcctggctggcccgc
gagacgccgcgcctgatgcaggtggagcgggtgatcaattgcgccgccgtagcgtcgttctcgaagaacccg
accatctggccggtcaacgtcgacggcactttcgccttcgccgacgtgctgagccgttcgaagcgactgaag
cgtttcctccacgtcggtaccgcgatgtgctgcggaccgcagcgagagtcgccgatcagcgagtcctgggag
ttcccggcggcggagcagcaactggtggactacaccgcgtccaaggcggaaatcgagcggcgtatgcgcgag
gaactgccgggcctgcccctggtggtggcgcggccatccatcgtggtgggccaccgtacccttggctgccag
gcctccggtagcatcttctgggtcttccgcatgggcttcgccctggaaagcttcacctgcggcctggacgag
cagatcgacgtgatcccggtcgactactgcgccgaggcgctgatcggcctggcgctgaagccgtgcctgggg
cacagcctctaccatatctccgccggccatcgcgcggcctgcaccttcggtgagatcgacgaggccttcgcc
cgcgccaacggggcggcgccggtaggcgagcgctaccgcaaggtggaggtggacgacctcaaggaactggcg
aagagcttcgagtcgcgcatcggcccggccaatccgcgtctggtcctgcgcgcgttgcgcttgtacagcggc
tttgccgacctcaactacctgttcgacaacagccgtctgcttgaggaggggatctccgcgccaccgcgcttc
accgactacctcgacgtctgcgtgcagtcgtccagcgcggtgagcatcccggcgcagatgcaatgggacttc
aagtga
Translation:
MNMHADGEQITAIDTRERILLTGATGFLGGSVSAQLIAAGHGANLSFLVRAESRQQGLERLRGNLLMHGVDE
TDCLALRAEQILCGDFLDTSWLARETPRLMQVERVINCAAVASFSKNPTIWPVNVDGTFAFADVLSRSKRLK
RFLHVGTAMCCGPQRESPISESWEFPAAEQQLVDYTASKAEIERRMREELPGLPLVVARPSIVVGHRTLGCQ
ASGSIFWVFRMGFALESFTCGLDEQIDVIPVDYCAEALIGLALKPCLGHSLYHISAGHRAACTFGEIDEAFA
RANGAAPVGERYRKVEVDDLKELAKSFESRIGPANPRLVLRALRLYSGFADLNYLFDNSRLLEEGISAPPRF
TDYLDVCVQSSSAVSIPAQMQWDFK*
AnnotationID:7212GeneID:7357
AnnotatorUID: danlee
Modification Date/Time: 2006-02-07 18:06:04
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:(1) Cytoplasmic
Synonyms:
Cell Localization Confidence Code:3
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer 
membrane / Carbohydrate transport and metabolism].
             CD-Length = 314 residues,  84.1% aligned
             Score = 80.4 bits (197), Expect = 3e-16






   
Genomic Context:






   
Comment:
Confirmed frame-shift in middle of this ORF results in fusion of PAO1 
PA1559 and PA1560 genes into a single ORF.