ViewGene

Locus Name:
GeneID:
Location:

GeneID:7355
TrivialName: PA14_09115
AnnotatorUID: danlee
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_09115
PAO1 Ortholog Locus:PA4238
Sequence Length:1002
Protein Length:333
Start: 771395
Stop: 772396
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Full-length rpoA gene entered manually (9-09-05) unifies previous 2 rpoA fragments (GID 6616 and 6615) separated by frame-shift error (now corrected).
Sequence:
atgcagagttcggtaaatgagttcctgaccccccgccacatcgatgtgcaggtggtcagtcaaacccgcgcc
aagatcacgctcgagcctctcgagcgtggttttggtcacaccctgggcaacgcgctgcgtcgcatcctgttg
tcctccatgcctggctgcgcagtggtcgaggccgagatcgacggcgtactccacgagtactcggcgatcgaa
ggtgtgcaggaagatgtaatcgagatcctgctgaacctgaaaggtctggccatcaagctgcacggtcgtgat
gaagtgacgctgaccctggctaagaagggctcgggtgttgtgactgctgccgatattcagctggatcacgat
gttgagatcatcaacggtgaccacgttatcgccaacctggcagacaacggcgcgctgaacatgaagctgaag
gtagctcgtggccgtggctacgagcctgccgatgcacgtcagagcgacgaagacgaaagccgcagcatcggc
cgtctgcagctcgacgcatcgttcagcccggtccgtcgtgtctcctacgtggtggaaaacgcccgtgtcgag
cagcgcaccaacctggacaaactggtcctggacctggaaaccaacggcactctggatcccgaagaggctatc
cgtcgcgccgctaccatcctgcaacagcagctggcagcgttcgtggacctcaagggcgacagcgaacccgtc
gttgaagagcaggaagacgagatcgatccgatcctcctgcgcccggtcgatgacctggaactgaccgtacgt
tcggccaactgcctgaaggcggaaaacatctactacatcggtgacctgatccagcgcaccgaagtggagctg
ttgaaaacgccgaacctgggcaagaagtccctgaccgaaatcaaggacgttctggcttcccgtggtttgtcc
ctcggtatgcgcctcgataactggccgccggcaagtcttaagaaagacgacaaggccactgcctga
Translation:
MQSSVNEFLTPRHIDVQVVSQTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAEIDGVLHEYSAIE
GVQEDVIEILLNLKGLAIKLHGRDEVTLTLAKKGSGVVTAADIQLDHDVEIINGDHVIANLADNGALNMKLK
VARGRGYEPADARQSDEDESRSIGRLQLDASFSPVRRVSYVVENARVEQRTNLDKLVLDLETNGTLDPEEAI
RRAATILQQQLAAFVDLKGDSEPVVEEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVEL
LKTPNLGKKSLTEIKDVLASRGLSLGMRLDNWPPASLKKDDKATA*
AnnotationID:7210GeneID:7355
AnnotatorUID: danlee
Modification Date/Time: 2005-09-14 14:02:52
Gene Name:rpoA
Confidence Code:2
GeneProduct:DNA-directed RNA polymerase alpha chain
Cell Localization:(1) Cytoplasmic
Synonyms:PA4238
Cell Localization Confidence Code:3
MolecularFunction:
Functional Category:(24) Transcription, RNA processing and degradation
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment: