ViewGene

Locus Name:
GeneID:
Location:

GeneID:7262
TrivialName: PA14_15400
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_15400
PAO1 Ortholog Locus:
Sequence Length:888
Protein Length:295
Start: 1304902
Stop: 1305789
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGGCCGGAGGCGAAGCGATGGCTTTTGACCTCACCCATGCCAGGCACGATCCAATGCACTGCTTGGTCCCC
GGCTTGTTCCGCAGTCTCAAACGCGGAGAACGGAAGAAACTCAAGCTCGATGTGACGTATCACTACGCCGAG
AATGAACAAGCGCGGTTCGTCGGCTTTGAGCCGCTCGGTGCCGATGACATGCGGCTGCTGCAAGGTCTGGTG
GCTCTTGGCGGGCCGAAAGGCATTATCCTGACGTCGGAGCCAACAGCAGACTTACCGAAGCAGCTCCGTCTA
TTCCTTGAGCCAAAATTTGACGCGGTAGGGCAGGATGCGCTTGTCGTGAGAGAGAGCATGGCCAGCCTACTA
AGCGAGATCGGCTTGACCGATGGCGGCGACAATATCAGGGCGATCAAGGCGTGCTTGCTGCGCATGGCAAAC
GTGACAGTAGTAGTCACCAAAGGGAGCAGGCAACGGTCTTTTCACTTGATGAGCTATGCCTTCGATGAGGAG
GACGGACGGCTATTCGTCGCGCTGAATCCTCAGATTGCAGAGGCGATTCTTGGGCGGCGTCCGTATACCCGC
ATTGAGATGGCCGAGGTGCGGGCGCTACAAACCGATCCGGCCCGCCTGATTCACCAACGACTATGCGGCTGG
ATCGATCCTGGCAAAGCCGGCCGCGTGGAACTGGATACCCTTTCCGGTTACGTTTGGCCGGACGACGCGAAC
GCTGAGGCCATGAAGAAGCGCCGTCAGAAGGCCCGCAAGGCTCTGGCCGAGCTTGCCGCCGTGGGCTGGAAG
GTGTCCGAATATGCGGAAGGGAAGTGGGAAATCGGGAGGCCGAAGCCCGTAGTAACGTTCCCCAATCTCCGT
AGTAACGTTCCCCTTCACCCGTAG
Translation:
MAGGEAMAFDLTHARHDPMHCLVPGLFRSLKRGERKKLKLDVTYHYAENEQARFVGFEPLGADDMRLLQGLV
ALGGPKGIILTSEPTADLPKQLRLFLEPKFDAVGQDALVVRESMASLLSEIGLTDGGDNIRAIKACLLRMAN
VTVVVTKGSRQRSFHLMSYAFDEEDGRLFVALNPQIAEAILGRRPYTRIEMAEVRALQTDPARLIHQRLCGW
IDPGKAGRVELDTLSGYVWPDDANAEAMKKRRQKARKALAELAAVGWKVSEYAEGKWEIGRPKPVVTFPNLR
SNVPLHP*
AnnotationID:7270GeneID:7262
AnnotatorUID: danlee
Modification Date/Time: 2005-10-17 15:03:43
Gene Name:
Confidence Code:3
GeneProduct:putative replication protein, RepC
Cell Localization:()
Synonyms:repC
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(22) Related to phage, transposon, or plasmid
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
gi|71485203|gb|EAO17754.1|  Replication C [Nitrosomonas eutropha C71] 
gi|30042150|gb|AAP17876.1|  putative replication protein C [Shigella flexneri 2a str. 2457T]
    Length=293
     Score =  456 bits (1173),  Expect = 4e-127
     Identities = 220/286 (76%), Positives = 249/286 (87%), Gaps = 0/286 (0%)

gi|154648|gb|AAA27382.1|  replication protein C
     Length=299
     Score =  348 bits (894),  Expect = 9e-95
     Identities = 174/300 (58%), Positives = 225/300 (75%), Gaps = 15/300 (5%)

gi|12084807|ref|NP_073217.1|  replication protein C [Dichelobacter nodosus]
gi|10957118|ref|NP_065286.1|  putative initiator protein [uncultured eubacterium pIE1115]
     Length=283
     Score =  320 bits (820),  Expect = 4e-86
     Identities = 152/273 (55%), Positives = 204/273 (74%), Gaps = 2/273 (0%)
Structural Features:
Genomic Context:
adjacent to repA-homolog
Comment:
ReferenceID:38225
Author/Investigator(s): Dorrington,R.A. and Rawlings,D.E.
Title: Characterization of the minimum replicon of the broad-host-range plasmid pTF-FC2 and similarity between pTF-FC2 and the IncQ plasmids
PubMed: 2120189
MedLine:
Source:
J. Bacteriol. 172 (10), 5697-5705 (1990)
Reference Type:Journal
Data:
URL: