ViewGene
Locus Name:
GeneID:
Location:

GeneID:7252
TrivialName: PA14_22080
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_22080
PAO1 Ortholog Locus:
Sequence Length:696
Protein Length:231
Start: 1922695
Stop: 1922000
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGAAAGTAGTTGCATACCAGCGAGTATCCACTTCCAAACAGGAAGCCTCCGGCTTGGGGCTGGAAGCCCAA
CGGGAGTACATCCTCGCAGCCGCTAAGGCTGAAGGCTGGGAAGTGGTCGAATGGTATGTCGAGGCTATCAGT
GGCTCCGTGGCTCCGGAGGAGCGGCCTGTAATGTCTCAGGCTATCGCCTCTGGGCTGCCTGTCGTGGTAGCG
AAGCTAGACCGTATTGGCCGTGATGTTGAGCACGTAGCCGCTCTGATGAAGCAAACCACTATCAAAGTGGCC
ACCATGCCGAAAGCGGATGCTTTCCAGCTCCACCTCTTCGCTGCTCTCGCAGAACAGGAGCGCCAGTTTATT
CGTCAGCGTACCAAGGACGCCCTGCAAGCCCTCAAGGAGCGGGCTGAGAGTGGTTGTGAAGAGAGTAAGGCT
AAGGTAGCCCGTAGAGACGAAGCACTCTCCAAGGGCCATACAGACGCCATCAGAGCCAAAGGCCGCGAGGCC
TTAACACACAAGGCTGACACCTTCGCTGAGTCCGTTAGGTCTGACTTCGAATCCTGCCTGTTCAGGGGCTGC
AACACTCTACAATCGATGGCTGATTGCTTGAATGGTAGGAAGGTGGCTACGGCCCGTGGCTGTGAGTGGACT
CCGATTGCTGTTTCTCGTCTGATGAAGCGTTTAAATCTCGCTTTCTGA
Translation:
MKVVAYQRVSTSKQEASGLGLEAQREYILAAAKAEGWEVVEWYVEAISGSVAPEERPVMSQAIASGLPVVVA
KLDRIGRDVEHVAALMKQTTIKVATMPKADAFQLHLFAALAEQERQFIRQRTKDALQALKERAESGCEESKA
KVARRDEALSKGHTDAIRAKGREALTHKADTFAESVRSDFESCLFRGCNTLQSMADCLNGRKVATARGCEWT
PIAVSRLMKRLNLAF*
AnnotationID:7252GeneID:7252
AnnotatorUID: danlee
Modification Date/Time: 2005-10-14 17:05:02
Gene Name:
Confidence Code:4
GeneProduct:possible resolvase
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:
gi|77459722|ref|YP_349229.1|  Resolvase-like [Pseudomonas fluorescens PfO-1]
gi|77383725|gb|ABA75238.1|  Resolvase-like [Pseudomonas fluorescens PfO-1]
     Length=248
     Score =  249 bits (636),  Expect = 5e-65
     Identities = 135/234 (57%), Positives = 167/234 (71%), Gaps = 8/234 (3%)

gi|24982554|gb|AAN66741.1|  site-specific recombinase, resolvase family [Pseudomonas putida KT2440]
gi|26987852|ref|NP_743277.1|  site-specific recombinase, resolvase family [Pseudomonas putida KT2440]
     Length=236
     Score =  201 bits (511),  Expect = 2e-50
     Identities = 113/233 (48%), Positives = 151/233 (64%), Gaps = 4/233 (1%)






 
Structural Features:
COG1961, PinR, Site-specific recombinases, DNA invertase Pin homologs [DNA replication, recombination, and repair].
             CD-Length = 222 residues, only  64.4% aligned
             Score = 75.6 bits (185), Expect = 5e-15

pfam00239, Resolvase, Resolvase, N terminal domain.
             CD-Length = 139 residues, 100.0% aligned
             Score = 58.7 bits (142), Expect = 6e-10






   
Genomic Context:






   
Comment: