ViewGene
Locus Name:
GeneID:
Location:

GeneID:7234
TrivialName: PA14_23410
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_23410
PAO1 Ortholog Locus:
Sequence Length:843
Protein Length:280
Start: 2033233
Stop: 2034075
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homolog: gb|AAM27712.1|AF498411_9 (AF498411) ORF_9; similar to Glycosyl transferase [Pseudomonas aeruginosa]
Sequence:
GTGAAAATTTGTCTGGTTCCTGTTTGTTATAATGCTCACGATGATGCAGTAAGGTTTCTTGACTCTGTAAAT
ACCGCATTTAGCTTCTGCCTTGGGGTGGAACTAGAGGTGATATTATCTGACAACTCTACGCTCTCCTCAGTT
ATAACGTTTGATGCACGAAATTATTCGTATAACTTTCGCTATCTGCAGAATAGTAATATTGGGTATTTCCCT
GCATTTGCTCGGGCGCTATCTACACTGACTGAACCTATTGATAGTTATGATTTTGTTATGGTTTGTAATGTT
GACCTTGTTGTATCTAAGGATTTCTTTATAGCACTTTCATCTGTCTCTCCTGGTAAGGATGTAGGGCTTATT
GCTCCGGGGATTTTTTCTGATAAAGATGGGCGAGACCTAAATCCAAAAATTATGCGTCGGCCAAGTCTGAGA
AAAATGAAGTTCATGCGCATGGTTTGCTCAAGTACTGCTCTTTTTCGTTGGTACTCTATGCTGGTACGTGCT
CGTGAACGTACTCGTGCTTGTACGCAGCGTAAAATAGCAAAAAAAGGGGGGGCGATAGGGGGGCAACCGGCT
ATGTACGGTGCGCATGGATCTTTTATTATATTCACTCAGCTATACTTTAAGCGAGGTGCTCATGTTTTATAT
CCTCGCTTTTTATTTGGTGAGGAGGTTTTTGTTGCGGAGCAGTTACGATTGAATAATATGCTTATTCAGCAT
GTTCCTGATGTTCGGGTGTCTGATAAGGAGCATGCGTCAACCTCTAAAATTAAATTAAAATTTATTTGCCCC
GAGCATAGAAAGTCATATGAGTATTTGCTGTCAAAGTTTTTTGATGATTAA
Translation:
MKICLVPVCYNAHDDAVRFLDSVNTAFSFCLGVELEVILSDNSTLSSVITFDARNYSYNFRYLQNSNIGYFP
AFARALSTLTEPIDSYDFVMVCNVDLVVSKDFFIALSSVSPGKDVGLIAPGIFSDKDGRDLNPKIMRRPSLR
KMKFMRMVCSSTALFRWYSMLVRARERTRACTQRKIAKKGGAIGGQPAMYGAHGSFIIFTQLYFKRGAHVLY
PRFLFGEEVFVAEQLRLNNMLIQHVPDVRVSDKEHASTSKIKLKFICPEHRKSYEYLLSKFFDD*
AnnotationID:7248GeneID:7234
AnnotatorUID: danlee
Modification Date/Time: 2005-10-14 12:12:32
Gene Name:ORF_9
Confidence Code:4
GeneProduct:similar to Glycosyl transferase
Cell Localization:()
Synonyms:orfJ
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(7) Cell wall / LPS / capsule
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:
gi|20559949|gb|AAM27712.1|  ORF_9; similar to Glycosyl transferase [Pseudomonas aeruginosa]
 gi|20559782|gb|AAM27561.1|  ORF_9; similar to Glycosyl transferase [Pseudomonas aeruginosa]
          Length=280

 Score =  565 bits (1455),  Expect = 8e-160
 Identities = 280/280 (100%), Positives = 280/280 (100%), Gaps = 0/280 (0%)






 
Structural Features:
COG1216, Predicted glycosyltransferases [General function prediction only].
             CD-Length = 305 residues,  80.0% aligned
             Score = 47.0 bits (111), Expect = 2e-06






   
Genomic Context:
Part of variable O-antigen biosynthetic locus in P. aeruginosa.







   
Comment:
Identical to ORF_9 found in P. aeruginosa serotypes 010 and 019.



















    ReferenceID:38219




  
Author/Investigator(s):
        





  
Title:
        




  
PubMed:
        12057956


MedLine:
        




    
Source:






    
Reference Type:Journal 







    
Data:


    		




 
URL: