ViewGene
Locus Name:
GeneID:
Location:

GeneID:7229
TrivialName: PA14_28790
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_28790
PAO1 Ortholog Locus:
Sequence Length:162
Protein Length:53
Start: 2478975
Stop: 2479136
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homolog: gb|AAO54576.1| (AE016859) virulence-associated protein, putative [Pseudomonas syringae pv. tomato str. DC3000]
Sequence:
ATGGAGCTGATTTATTGGGCCGAGAAATCGGCGACTCCTGAGCGCAATCTGTCTGACATTGATGGACTTGCT
GCGCGCCTGGAAGTACTGAAGTACGACCAAGGTGTTGCCGCTCATACCGGACAGCTACGTGCAAAGCTGGTC
AGGGCTGGTACTCACTGA
Translation:
MELIYWAEKSATPERNLSDIDGLAARLEVLKYDQGVAAHTGQLRAKLVRAGTH*
AnnotationID:7241GeneID:7229
AnnotatorUID: danlee
Modification Date/Time: 2005-10-12 15:03:57
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:
gi|37955758|gb|AAP22597.1|  putative nucleic acid binding protein [Pseudomonas aeruginosa]
gi|32364343|gb|AAP80274.1|  MvpA [Pseudomonas aeruginosa]
     Length=136
     Score = 79.0 bits (193),  Expect = 4e-14
     Identities = 38/51 (74%), Positives = 43/51 (84%), Gaps = 0/51 (0%)

gi|28851499|gb|AAO54576.1|  virulence-associated protein, putative [Pseudomonas syringae pv. tomato str. DC3000]
     Length=134
     Score = 73.6 bits (179),  Expect = 2e-12
     Identities = 34/52 (65%), Positives = 43/52 (82%), Gaps = 0/52 (0%)

gi|63254856|gb|AAY35952.1|  PilT protein, N-terminal [Pseudomonas syringae pv. syringae B728a]
     Length=134
     Score = 72.4 bits (176),  Expect = 4e-12
     Identities = 34/52 (65%), Positives = 41/52 (78%), Gaps = 0/52 (0%)






 
Structural Features:
COG1487, VapC, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only].
             CD-Length = 133 residues, only  38.3% aligned
             Score = 33.6 bits (76), Expect = 0.006






   
Genomic Context:






   
Comment: