ViewGene
Locus Name:
GeneID:
Location:

GeneID:7228
TrivialName: PA14_28780
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_28780
PAO1 Ortholog Locus:
Sequence Length:285
Protein Length:94
Start: 2478590
Stop: 2478874
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homolog: gb|AAO54577.1| (AE016859) virulence-associated protein, putative [Pseudomonas syringae pv. tomato str. DC3000]
Sequence:
GTGATGGACCTTGTGTATGTCCCCCGGAGGTGGTTAATGGAGCAAGGCGCCGTGTTTCAGAATAACTGTAGC
CAGGCTGTGTGTTTGTCCAAAGCAGCTGCGTTGTCAGGTGAGGTGAAGCGTGTCGACATCGTTGTGGTTGGC
AGGACCAAGATCATCATACCGGCAGGTGAGGTCTGGGAAAGTTGGTTCGATGATAAGGGCGTGACGGCTGGT
TTATGCCTGAACGAGATCAATTATCAGGTAAGGCGAGCGAGGCGTTTTGATGCTGAAGTATCATGCTGA
Translation:
MMDLVYVPRRWLMEQGAVFQNNCSQAVCLSKAAALSGEVKRVDIVVVGRTKIIIPAGEVWESWFDDKGVTAG
LCLNEINYQVRRARRFDAEVSC*
AnnotationID:7240GeneID:7228
AnnotatorUID: danlee
Modification Date/Time: 2005-10-12 15:03:19
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:
gi|37955759|gb|AAP22598.1|  putative virulence-associated protein [Pseudomonas aeruginosa]
gi|32364342|gb|AAP80273.1|  MvpT [Pseudomonas aeruginosa]
     Length=76
     Score = 86.7 bits (213),  Expect = 2e-16
     Identities = 42/59 (71%), Positives = 49/59 (83%), Gaps = 0/59 (0%)

gi|28851500|gb|AAO54577.1|  virulence-associated protein, putative [Pseudomonas 
syringae pv. tomato str. DC3000]
     Length=76
     Score = 77.4 bits (189),  Expect = 1e-13
     Identities = 37/58 (63%), Positives = 45/58 (77%), Gaps = 0/58 (0%)

gi|63254857|gb|AAY35953.1|  SpoVT/AbrB-like [Pseudomonas syringae pv. syringae B728a]
     Length=76
     Score = 77.0 bits (188),  Expect = 2e-13
     Identities = 36/58 (62%), Positives = 45/58 (77%), Gaps = 0/58 (0%)






 
Structural Features:
COG4456, VagC, Virulence-associated protein and related proteins [Function unknown].
             CD-Length = 74 residues, only  64.9% aligned
             Score = 46.9 bits (111), Expect = 5e-07






   
Genomic Context:






   
Comment: