ViewGene
Locus Name:
GeneID:
Location:

GeneID:7224
TrivialName: PA14_30690
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_30690
PAO1 Ortholog Locus:
Sequence Length:1056
Protein Length:351
Start: 2660507
Stop: 2659452
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGAAAAAGCCAGCTCCCGCACACATCAAGCTACTCTTCTGCATTGGTATATCGACCGCTGGATGCCTTTGG
TCGCTCTCCTCGGTGGCCTATTGCGGCAAGCCTGAACTACCTACCAAGACCCCCCTGCCGATACAGAGCCTC
CAATCCGTTTTCACCTTGAAGCACGCACCGATCGGTAAATCGATGGGAACAATGACCGTGCAAGTCGGCTCA
GGAGAAACTCTAGGTGGCTGGGCGTGGTGCGGAAGTGACGGAAAGCCCGGACAATTCGGTTTTACAGCTCCC
AAAACTACCCTCATTCCAATAGATGGAAATGGCCTCTATGAGTCTGGAGTGCCAGGGGTCGGTATCAGAATT
GGACACCGAGCACGCTATAACTGGACCGAACCGACAGCAGCTCCCGCCACCTACCCCACGGGCAACATCGGC
ACCATGCGCTATATGCCCACTGTTCTCGTAGTTGATTTCATCCGAACCGCAATGGGAGTAGGAAAGGGAGAC
ATCACCCCTTTTAACTACTCAACCAATTTTTTCATCGATACCAACTACACAAATCCATCCAGGGCTGAATTC
ACCATAGAGGGATATAACCTTCGCGCAACGCTTGAACATAACGCTTTCTTCACCACGTGCAGCACACAAAAG
TCGACCATTGATGTCAACATGGGGCGCCCAACGGCGTATGACATCAAAAGAGGGGCTGTGCCAGATCATGGC
TTTTCACTGGATGTTGTGTGCGAAGGACTCAATCCGAGTGTCAAACCTCCTGTGAAGGTCTACTTTGAAGGA
AACTCGATCCAGGATGGCCTGTTGAACCTCACAGGCAGAGGAGAAGCCGGTGTAGCCCAAGGAGTCGGCATT
TCGTTGATGTCCAGTAAAGGAGCGGCATTGCCATTCACCCAAGCCAAGGCCCTGCCCCTGGACTGGCTGGCC
AGCGGTGCTGGGACGGAGATGTACCGCTTTGTGGGATCGGCTCGCTATGTCGCCACTGGCGGAAAAATCACC
GCGGGTAAAGCTGACTCCATTTTGACCTACATCCTGGAGTACAACTAA
Translation:
MKKPAPAHIKLLFCIGISTAGCLWSLSSVAYCGKPELPTKTPLPIQSLQSVFTLKHAPIGKSMGTMTVQVGS
GETLGGWAWCGSDGKPGQFGFTAPKTTLIPIDGNGLYESGVPGVGIRIGHRARYNWTEPTAAPATYPTGNIG
TMRYMPTVLVVDFIRTAMGVGKGDITPFNYSTNFFIDTNYTNPSRAEFTIEGYNLRATLEHNAFFTTCSTQK
STIDVNMGRPTAYDIKRGAVPDHGFSLDVVCEGLNPSVKPPVKVYFEGNSIQDGLLNLTGRGEAGVAQGVGI
SLMSSKGAALPFTQAKALPLDWLASGAGTEMYRFVGSARYVATGGKITAGKADSILTYILEYN*
AnnotationID:7353GeneID:7224
AnnotatorUID: danlee
Modification Date/Time: 2006-03-28 12:12:20
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:
gi|71901950|ref|ZP_00684003.1|  Fimbrial protein [Xylella fastidiosa Ann-1]
 gi|71728291|gb|EAO30469.1|  Fimbrial protein [Xylella fastidiosa Ann-1]
Length=322

 Score = 61.2 bits (147),  Expect = 6e-08
 Identities = 70/258 (27%), Positives = 115/258 (44%), Gaps = 33/258 (12%)

gi|9104853|gb|AAF82891.1|  fimbrial adhesin precursor [Xylella fastidiosa 9a5c]
Length=354

 Score = 60.8 bits (146),  Expect = 8e-08
 Identities = 65/265 (24%), Positives = 117/265 (44%), Gaps = 22/265 (8%)








 
Structural Features:
pfam00419, Fimbrial, Fimbrial protein..
             CD-Length = 151 residues,  92.1% aligned
             Score = 54.1 bits (130), Expect = 3e-08

COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular 
trafficking and secretion].
             CD-Length = 184 residues, only  79.3% aligned
             Score = 48.6 bits (115), Expect = 1e-06








   
Genomic Context:






   
Comment: