ViewGene
Locus Name:
GeneID:
Location:

GeneID:7208
TrivialName: PA14_46460
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_46460
PAO1 Ortholog Locus:
Sequence Length:1191
Protein Length:396
Start: 4134890
Stop: 4133700
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGTACCGTACGATTGATGTTCATGTCGATGAGTCCAGTTGGCCTGGCGTCGGCAAGACTCCAAGTTTTCCA
CCTGCTTTCACAGCAGGTACCAATAATTTCAATCTGAATATCAACGCGATGTTATTGATGATCGGTTACTTG
ACAACACCGACATCTGTCACTGGCGTTTCGCTTGCAGAGTTCTGGGCGTGGGTTAGGTATCTGGCAGCGATC
ACCCCCCATGATGCGGATCTGCGTTTGACAAGAAGTTATGCAGATCTTGATGCGCATCAGAAAACCATTCTG
AGCGATGACTTCGGAATGGGAGTGCCGATCGTCTGGCTCATTAAACATTTGCCATTGGTTGAAATTGTTGAT
GGCCGCTATTTTTTGCAACGCTATGGTGCGAGACATGGCGCACACCAGCATCGCACGGCAAAGCGAGGACCA
AATAAGACGCCTGACTTCGTGGCGCGAGACCGCGATGGCAACTGGCACATTTTAGAATGTAAGGGCACCCAA
TCTGGCGAGGCTTTCAGGAATCGTCAAATCAATTCGGGCGTATCCCAGAAACTCTCAATCATATTTCCGTCT
GGACATACAGGCCAACGGTTGGTCTCAGGTCTTAGTATAGGCATTGAAGATGGCAATTCAAGTCACCTGAGG
ATCATTGATCCAGTACCCGACGATCCCGTAACAATTGCTGAAAGTGAACTGGAGTTTGCTCAAGATGCAGCA
ACCCGTGGCGTAATGGCTAAACTGCTTCGGTCGACAGGTTTCGAAATTTCGGCAGAGGCTGTAGCTGCACCG
TTCGGCAAACCACAAGCTATGCCTCCCTCGAAAAGAAAGGCGGATAAGAAACGCGTCGAGTACATAGCAGAT
CGAGACCGTCGTGCACGAGAAGAGCTGTTGGAAAGCACCTCAAGAGATCATCTTTTCAACGGTCGCTATCGC
GGTCGTGAGGTTACTTTCCAGTTGCCGAGGCCAATCTACATTCGTGACGTGGCGATTTCAAAAGTTACTGTA
AGACAAGGTATCAACCTGGATGCACTAGACCTGCTCCGTGAGCAACCTACCATCGATGCGCTGGTTGACCCA
TCCCGCAACAATTGGATCGACATGATGGGCACAAACATCATCAGCGATGACGAGCAAGCCGCGACGTTGCAG
ATCGGGGATATTTTCCGGTCCGAGATGATTCTTGAATGA
Translation:
MYRTIDVHVDESSWPGVGKTPSFPPAFTAGTNNFNLNINAMLLMIGYLTTPTSVTGVSLAEFWAWVRYLAAI
TPHDADLRLTRSYADLDAHQKTILSDDFGMGVPIVWLIKHLPLVEIVDGRYFLQRYGARHGAHQHRTAKRGP
NKTPDFVARDRDGNWHILECKGTQSGEAFRNRQINSGVSQKLSIIFPSGHTGQRLVSGLSIGIEDGNSSHLR
IIDPVPDDPVTIAESELEFAQDAATRGVMAKLLRSTGFEISAEAVAAPFGKPQAMPPSKRKADKKRVEYIAD
RDRRAREELLESTSRDHLFNGRYRGREVTFQLPRPIYIRDVAISKVTVRQGINLDALDLLREQPTIDALVDP
SRNNWIDMMGTNIISDDEQAATLQIGDIFRSEMILE*
AnnotationID:7354GeneID:7208
AnnotatorUID: danlee
Modification Date/Time: 2006-03-28 17:05:46
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:
gi|83949942|ref|ZP_00958675.1|  50S ribosomal protein L20 [Roseovarius nubinhibens ISM]
 gi|83837841|gb|EAP77137.1|  50S ribosomal protein L20 [Roseovarius nubinhibens ISM]
Length=332

 Score =  172 bits (436),  Expect = 2e-41
 Identities = 115/334 (34%), Positives = 173/334 (51%), Gaps = 15/334 (4%)

gi|69929537|ref|ZP_00626414.1|  hypothetical protein NhamDRAFT_1712 [Nitrobacter hamburgensis 
X14]
 gi|69141418|gb|EAN60003.1|  hypothetical protein NhamDRAFT_1712 [Nitrobacter hamburgensis 
X14]
Length=242

 Score =  147 bits (370),  Expect = 1e-33
 Identities = 76/116 (65%), Positives = 87/116 (75%), Gaps = 2/116 (1%)








 
Structural Features:






   
Genomic Context:






   
Comment: