ViewGene

Locus Name:
GeneID:
Location:

GeneID:7197
TrivialName: PA14_33630
AnnotatorUID: danlee
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_33630
PAO1 Ortholog Locus:PA2400
Sequence Length:6570
Protein Length:2189
Start: 2972068
Stop: 2978637
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: PA2400 [gene=pvdJ] [prot=PvdJ], Length = 2157, Score = 4242 bits (11002), Expect = 0.0, Identities = 2146/2157 (99%), Positives = 2150/2157 (99%)
Sequence:
ATGCTTTCCAATCCAAACCTGGACCTCGTGTCCCGCTTCGTTCGCCTGCCTCTGGCGCAGCAGAAATTGTTC
TATCAGCGTGTCCAGGCCAAGGGCATGAGCTTCGCCCGCCTGCCGATCCCGCAGACTCGCCAGGAGATGGAC
AACCTGCCGCTGTCCTATGCCCAAGAGCGGCAGTGGTTCCTCTGGCAGCTGGAGCCGGAGAGTTCCGCCTAC
CACATTCCTACCGCCCTGCGCCTGCGCGGTAGGTTGGACATTGCGTCCTTGCAGCGCAGCTTCGCGGCGCTC
GTCGAGCGGCACGAAAGCCTGCGCACGCGGATCGCGCGGATGGGTGATGAATGGGTGCAGGTCGTCTCCGCC
GACGTCTCGCTGGCGCTCGAAGTCGAAGTGCAACGGGGACTCGACGAACAGCGATTGCTGGAGCGGGTCGAG
GCGGAGATCGCACGACCCTTCGATCTCGAACAGGGACCGTTACTGCGGGTGACTTTGCTGGAGGTGGACGCC
GACGAGCATGTGCTGGTCATGGTCCAGCACCATATCGTCTCCGACGGTTGGTCGATGCAATTGATGGTCGAG
GAACTGGTCCAGCTCTATGCCGGCTACAGCCAAGGGCTCGACGTGGTGTTGCCGGCCCTGCCGATCCAGTAC
GCGGACTACGCCCTGTGGCAGCGCAGCTGGATGGAGGCGGGGGAAAAGGAGCGCCAGTTGGCGTACTGGACC
GGCCTGCTGGGCGGCGAGCAGCCGGTGCTGGAGTTGCCCCTCGATCACCCGCGGCAGCCGCTGCGCAGCTAT
CGTGGAGCGCAATTGGACCTGGAGCTGGAGCCACACCTGGCCCTTGCCTTGAAACAGCTGGTTCAGCGCAAG
GGTGTGACCATGTTCATGCTGTTGCTGGCTTCCTTCCAGGCGCTGTTGCATCGCTATAGCGGACAGGCGGAT
ATCCGTGTCGGCGTGCCGATCGCCAACCGTAACCGGGTTGAAACCGAGCGGATGATCGGTTTCTTCGTCAAC
ACCCAGGTGCTCAAGGCCGACATCAATGGCCGGATGGGTTTCGACGAGTTGCTGGCCCAGGCCCGCCAGCGC
GCGCTGGAGGCACAGGCGCACCAGGACCTGCCGTTCGAGCAACTGGTGGAGGCTTTGCAGCCGGAACGCAGC
CTCGGCCACAACCCGTTGTTCCAGGTCATGTTCAATCACCAGGCCGACTCTCGTTCGGCCAACCAGGGCGTG
CAACTGCCAGGCCTGTCGCTGGAGCGGATGGAGTGGCGGAGCAGCTCCGTGGCCTTCGACCTGACGCTGGAC
GTGCACGAGGCCGAGGACGGTATCTGGGCATCGTTCGGCTATGCCACGGATCTGTTCGAGGCCTCGACCGTC
GAGCGCCTGGCTCGGCACTGGCAGAATCTCCTGCGCGGCATCGTGGCCGAACCGGGCCGGCCGGTCGCCGAG
TTGCCGCTGTTGCTGGACGAGGAGCGCGATTGCCTGTTGCGGGCCTGGGCAGAGAACGCCGACGAGGGTGGG
TTGCCGCCCCTGGTCCAGTTGCAGATCCAGGAGCAGGCCCGTCTGCGTCCGCAGGCGCAAGCACTGGCGCTG
GAGGGGCAGGCGTTGAGCTACGCCGAGCTCAACGCCCGCGCCAATCGTCTGGCTCACTGCCTGATAGCGCGT
GGCGTCGGTCCCGATGTGCTGGTGGGAATCGCCGTCGAGCGCTCGCTGGACATGGTGGTCGGTCTGCTGGCG
ATCCTCAAGGCCGGTGGTGCCTATGTGCCGCTGGACCCGACCTATCCGCAGGACCGTTTGCGTCACATGCTC
GAGGACAGCGCCGTCGGCCTGTTGCTCAGCCAGGAGCATTTGCTGCCCGGGCTGCCTTTGCACGAAGGGCTG
GAGGTGCTCTCCATCGACCGCCTGGAACGGGACGCATCGGTGTCCACGGATGATCCGGTGGTGAACCTGCGG
CCGGAGAACCTGGCCTATGTGATCTACACCTCCGGCTCCACCGGAAAACCCAAGGGCGTGGCCATCAGCCAT
GCGGCGCTTGCGCAGTTCTCGCGTATCGCCAGTGGTTATTCCGCGCTCACCCCGGAGGATCGGATATTGCAG
TTCGCCACCCTGAGTTTCGACGGCTTCGTCGAACAGCTCTATCCGGCGCTGACCCGTGGTGCCTGCGTGGTC
CTGCGTGGCGGCGACCTCTGGGATACCGGTGAGCTGTATCGGCAGATAGTCGAGCAGGGCGTGACCCTTGCC
GACCTGCCCACGGCGTACTGGAACCTGTTCCTGCTCGATGCCCTGGCCGAGCCACGGCGTTCCTACGGTGCC
TTGCGGCAGATCCACATCGGTGGCGAAGCCATGCCACTGGAGGGGCCGAAGCTCTGGCGGCAAGCCGGCATG
GGCCGGGTGAGGTTGCTCAATACCTATGGACCGACCGAGGCCACGGTGGTGTCCAGCGTCTTCGATTGTTCC
GCCGAGAACGCCCGGGTGGGCAATGCCAGTCCTATCGGCCAGGCGCTACCCGGCCGTACGTTGCTGGTGCTG
GATGAACATCTCGGCCTACTGCCCGTAGGGGCGGTAGGCGAGCTTTATATCGCCAGCCGTGCCGGGCTGGCC
CGTGCCTACCACGATCGGCCCGGCTTGACCGCCGAGCGCTTCTTGCCCGACCCCTTCGGCGAACCGGGCTCG
AGGCTCTACCGGACCGGCGACCTGGCGCGCCGACGCGGTGACGGCGTGATCGAGTACATGGGGCGTGCCGAC
CATCAGGTGAAGATCCGCGGCTTCCGCATCGAGCTGGGGGAGGTCGAAGCCCGCCTCCTGGACTTGGAGGGA
ATACGCGAAGCGGCGGCTCTTGCGCTGGACGGTCAACTGGTGGCCTACCTGGTGGCTGAGGGGGGCGAGGAC
GAAACTCGCCAGCCGGCTTTGCGCGAGCGTATCCGCACAGCGCTACGGGCCTCGCTACCGGACTACATGGTG
CCCTCGCACCTGCTGTTCCTCGAGCGGATGCCGCTCAGTCCAAATGGCAAGCTGGACCGTCGGGCGCTGCCG
AAGCCGGATGCCGGCCTGATGCAACGCGACCACATGGCGCCGGCGAGCGCGCTGGAGAAAGATGTGGCCGCG
ATATGGGGCGAGTTGCTGGGCGTCGAACGGGTCGGCCTGACCGACAACTTCTTCGAATTGGGCGGACACTCG
CTGCTGGCGACGCGCCTGGTCTCGCGGATTCGCCAGGATCTCGGTATCGAAGTCAGCCTGAAGAGCCTTTTC
GAGCAGCCGGTCCTGCAGGGATTCGTCGAGAGCCTGGGCGAGAAACCGGCGGAGGTTCCGCCGATCACGCCC
GTTACCCGCGAGCAGCCGCTGCCGTTGTCCTATGCACAGGAGCGCCAGTGGTTCCTCTGGCAATTGGAACCG
GAGAGCGCGGCCTATCACATTCCCGCCGCCCTGCGCTTGCGCGGCGGCCTCGATGTCGTCGCGCTACAGCGC
AGTTTCGAGCGCCTTGCACAGCGTCACGAGTCGTTGCGTACCCGCTTCCGCCAGGAAGGCCTGCGTACCGTT
CAGGTGGTGGACGCCGATGGGCAGTTGCAGGTTTCCCGGCATAACCTGGCGAATGTCGATGACGCGTCGCTC
AGGGCGGCAGTCGAAGCGGAGATGGCCAGGCCCTTCGACCTACGGACGGATGCGTTGCTGCGGATCAGTCTG
TTCGAAGTGGCTCCGAATGACCATGTGCTGGTCATGGTCCAGCACCATATCGTCTCCGACGGTTGGTCGATG
CAGTTGATGGTCGAAGAGCTGGTCCAGCTCTATGCCGCCTACAGCCAGGGGCGCGAAGCGGCCCTGCCGGCG
CTGCCGATACAGTATCCGGACTATGCCGTCTGGCAGCGCGAATGGATGGAGGCCGGAGAGAGGGAGCGCCAG
TTGGCGTACTGGATCGGCCTGCTGGGTGGCGAACAGCCGGTGCTGGAGCTGCCGTTCGATCGTCCCCGTCCT
GCGGAGCAGAGCTTTCGCGGCGCGCGGCTGGAGTTCGAACTCGGCGCCGAGCGGGCCAGGCGGCTGAAGGCG
CTTGCCCAGCGGCAGGGTGCGAGTACCTTCATGTTGCTGCTGGCATCGTTCCAGGCGCTGCTGTATCGCTAC
AGCGGTCAGTCGGATATCCGTGTCGGCGTGCCGGTCGCCAATCGCAACCGGGTCGAAACCGAGCGACTGATC
GGGTTCTTCGTCAACACCCAGGTGCTCAAGGCCGACATCGATGGGCAGATGGGGTTCGAGCGATTGCTGCAC
CAGGTTCGCCAGCGCTCGCTGGAGGCGCAGGCGCACCAGGACTTGCCGTTCGAGCAACTGGTGGAAGCCTTG
CAACCGGAGCGCAGTCTCAGCCACAGCCCGCTGTTCCAGGTGCTATTCAACTACCAGGCGGAGCGGGGCGAG
CACGGCTTGCCGGAAGTCGCGGGACTGAGCATCGAAGAGCAGGCGTGGGAAAGCCATACGGCGCAGTTCGAC
CTGGTGCTGGATACCTGTGAGTCCGAGTCGGACATCTGGGCGGCGCTGGTCTATGCGACCGATCTATTCGAT
GCTTCGACCGCAGAGCGCCTGGTACGGCATTGGCAGAATCTGCTGGATGCGATCCTGGCGATGCCTGACGCT
CGCCTGGGAGAGCTGGACATGCTCGACCGCGAGGAGCGCGAAGTCATCGGGCAGCTCTGGAACCGCAGCGAC
TCGGGCTATCCGGCAACGCCGCTGGTACACCAGCGAGTGGCCGAGCGGGCGCGTATGGCGCCGGATGCGGTG
GCGGTGATCTTCGACGAGGAAAAGCTCACCTACGCCGAGCTGGATAGCCGGGCCAACCGCCTGGCCCATGCG
TTGATCGCCCTAGGCGTCGGCCCCGAGGTGCGGGTGGCGATCGCCATGCAGCGCAGCGCGGAGATCATGGTG
GCGTTCCTGGCGGTACTGAAGGCCGGCGGCGCCTACGTGCCGCTGGATATCGAATACCCGCGCGAGCGCCTG
CTGTACATGATGCAGGACAGTCGCGCGCACCTGCTGCTGACCCATAGCCACCTGCTGGAGCTTCTGCCGATC
CCCGAGGGGTTGTCCTGCCTGTCCGTGGATCGCGAGGAGGAGTGGGCCGGCTTCCCCGCCCATGATCCAGAG
GTGGCGCTGCACGGCGACAACCTGGCCTATGTGATCTACACCTCCGGCTCCACCGGCATGCCCAAGGGCGTG
GCGGTGCCCCACGGTCCGCTGATCGCCCATATCGTGGCTACCGGCGAGCGCTACGAGATGACCCCGGAGGAC
TGCGAGCTGCACTTCATGTCGTTCGCCTTCGACGGTTCCCACGAAGGCTGGATGCACCCGTTGATCAACGGC
GCGCGGGTGCTGATCCGCGACGACAGCCTGTGGCTGCCGGAACGGACCTACGCCGAGATGCATCGCCACGGG
GTAACGGTGGGGGTGTTCCCGCCGGTGTACCTGCAGCAACTGGCCGAGCATGCCGCGCGCGACGGCAATCCG
CCGCCGGTACGGGTCTACTGCTTCGGCGGCGACGCGGTGGCGCAGGCCAGCTATGACCTGGCGTGGCGGGCG
CTGAAGCCGAAGTACCTGTTCAACGGCTACGGCCCGACCGAGACGGTGGTGACGCCGCTGCTGTGGAAAGCG
CGAGCGGGCGATGCCTGCGGCGCGGCCTACATGCCGATCGGTACGCTGCTGGGCAACCGTAGCGGCTACATC
CTCGACGGGCAGTTGAACCTGCTGCCGGTAGGCGTGGCGGGCGAACTGTACCTGGGCGGGGAAGGGGTGGCG
CGCGGCTACCTGGAGCGTCCGGCGCTGACCGCCGAGCGTTTCGTGCCGGATCCCTTTGGTGCGCCGGGCAGC
CGGCTGTACCGCAGCGGCGACCTGACCCGTGGGCGTGCGGATGGGGTGGTGGATTACCTCGGACGGGTGGAT
CACCAGGTGAAGATCCGAGGCTTCCGCATCGAACTGGGAGAGATCGAGGCGCGCCTGCGCGAGCATCCGGCG
GTGCGCGAGGCGGTGGTGGTGGCCCAGCCGGGCGCGGTGGGCCAGCAGTTGGTGGGCTACGTGGTGGCGCAG
GAGCCGGCGGTCGCGGATTCGCCGGAAGCGCAGGCGGAGTGCCGGGCGCAGTTGAAGACGGCGCTGCGCGAG
CGCCTGCCGGAATACATGGTGCCGTCGCACCTGTTGTTCCTGGCGCGGATGCCGCTGACGCCGAACGGCAAG
CTGGACCGCAAGGGCCTGCCACAGCCGGATGCGAGCCTGTTGCAGCAGGTCTACGTGGCGCCGCGAAGCGAT
CTGGAGCAACAGGTCGCGGGGATCTGGGCGGAGGTCCTGCAATTGCAACAGGTCGGGCTCGACGACAACTTC
TTCGAACTCGGCGGCCACTCGTTGCTGGCCACCCAGGTCATTGGCCGCCTACGCGAACGACTGCACCTGGAG
GTGCCGATCAAGTCGATGTTCACCGCGGAGACACTGGGTGAGTTCTGCCACGGCGTCGAGACCCTCAAGGCC
GAGAGCGCGCCGGTGGAAGATGCCCTGGCTAAATCCCTGGAGGCGCTCAAACGTCTATCTGCCGATGAACTT
GAAAAACTGATTTCCTAA
Translation:
MLSNPNLDLVSRFVRLPLAQQKLFYQRVQAKGMSFARLPIPQTRQEMDNLPLSYAQERQWFLWQLEPESSAY
HIPTALRLRGRLDIASLQRSFAALVERHESLRTRIARMGDEWVQVVSADVSLALEVEVQRGLDEQRLLERVE
AEIARPFDLEQGPLLRVTLLEVDADEHVLVMVQHHIVSDGWSMQLMVEELVQLYAGYSQGLDVVLPALPIQY
ADYALWQRSWMEAGEKERQLAYWTGLLGGEQPVLELPLDHPRQPLRSYRGAQLDLELEPHLALALKQLVQRK
GVTMFMLLLASFQALLHRYSGQADIRVGVPIANRNRVETERMIGFFVNTQVLKADINGRMGFDELLAQARQR
ALEAQAHQDLPFEQLVEALQPERSLGHNPLFQVMFNHQADSRSANQGVQLPGLSLERMEWRSSSVAFDLTLD
VHEAEDGIWASFGYATDLFEASTVERLARHWQNLLRGIVAEPGRPVAELPLLLDEERDCLLRAWAENADEGG
LPPLVQLQIQEQARLRPQAQALALEGQALSYAELNARANRLAHCLIARGVGPDVLVGIAVERSLDMVVGLLA
ILKAGGAYVPLDPTYPQDRLRHMLEDSAVGLLLSQEHLLPGLPLHEGLEVLSIDRLERDASVSTDDPVVNLR
PENLAYVIYTSGSTGKPKGVAISHAALAQFSRIASGYSALTPEDRILQFATLSFDGFVEQLYPALTRGACVV
LRGGDLWDTGELYRQIVEQGVTLADLPTAYWNLFLLDALAEPRRSYGALRQIHIGGEAMPLEGPKLWRQAGM
GRVRLLNTYGPTEATVVSSVFDCSAENARVGNASPIGQALPGRTLLVLDEHLGLLPVGAVGELYIASRAGLA
RAYHDRPGLTAERFLPDPFGEPGSRLYRTGDLARRRGDGVIEYMGRADHQVKIRGFRIELGEVEARLLDLEG
IREAAALALDGQLVAYLVAEGGEDETRQPALRERIRTALRASLPDYMVPSHLLFLERMPLSPNGKLDRRALP
KPDAGLMQRDHMAPASALEKDVAAIWGELLGVERVGLTDNFFELGGHSLLATRLVSRIRQDLGIEVSLKSLF
EQPVLQGFVESLGEKPAEVPPITPVTREQPLPLSYAQERQWFLWQLEPESAAYHIPAALRLRGGLDVVALQR
SFERLAQRHESLRTRFRQEGLRTVQVVDADGQLQVSRHNLANVDDASLRAAVEAEMARPFDLRTDALLRISL
FEVAPNDHVLVMVQHHIVSDGWSMQLMVEELVQLYAAYSQGREAALPALPIQYPDYAVWQREWMEAGERERQ
LAYWIGLLGGEQPVLELPFDRPRPAEQSFRGARLEFELGAERARRLKALAQRQGASTFMLLLASFQALLYRY
SGQSDIRVGVPVANRNRVETERLIGFFVNTQVLKADIDGQMGFERLLHQVRQRSLEAQAHQDLPFEQLVEAL
QPERSLSHSPLFQVLFNYQAERGEHGLPEVAGLSIEEQAWESHTAQFDLVLDTCESESDIWAALVYATDLFD
ASTAERLVRHWQNLLDAILAMPDARLGELDMLDREEREVIGQLWNRSDSGYPATPLVHQRVAERARMAPDAV
AVIFDEEKLTYAELDSRANRLAHALIALGVGPEVRVAIAMQRSAEIMVAFLAVLKAGGAYVPLDIEYPRERL
LYMMQDSRAHLLLTHSHLLELLPIPEGLSCLSVDREEEWAGFPAHDPEVALHGDNLAYVIYTSGSTGMPKGV
AVPHGPLIAHIVATGERYEMTPEDCELHFMSFAFDGSHEGWMHPLINGARVLIRDDSLWLPERTYAEMHRHG
VTVGVFPPVYLQQLAEHAARDGNPPPVRVYCFGGDAVAQASYDLAWRALKPKYLFNGYGPTETVVTPLLWKA
RAGDACGAAYMPIGTLLGNRSGYILDGQLNLLPVGVAGELYLGGEGVARGYLERPALTAERFVPDPFGAPGS
RLYRSGDLTRGRADGVVDYLGRVDHQVKIRGFRIELGEIEARLREHPAVREAVVVAQPGAVGQQLVGYVVAQ
EPAVADSPEAQAECRAQLKTALRERLPEYMVPSHLLFLARMPLTPNGKLDRKGLPQPDASLLQQVYVAPRSD
LEQQVAGIWAEVLQLQQVGLDDNFFELGGHSLLATQVIGRLRERLHLEVPIKSMFTAETLGEFCHGVETLKA
ESAPVEDALAKSLEALKRLSADELEKLIS*
AnnotationID:7345GeneID:7197
AnnotatorUID: danlee
Modification Date/Time: 2006-03-16 17:05:35
Gene Name:pvdJ
Confidence Code:1
GeneProduct:PvdJ
Cell Localization:()
Synonyms:PA2400
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(1) Adaptation, protection
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG1020, pfam00501, COG0318
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
gi|60279950|gb|AAX16296.1|  PvdJ [Pseudomonas aeruginosa]
Length=2189

 Score = 4056 bits (10520),  Expect = 0.0
 Identities = 2179/2189 (99%), Positives = 2184/2189 (99%), Gaps = 0/2189 (0%)

gi|9948442|gb|AAG05788.1|  probable non-ribosomal peptide synthetase [Pseudomonas aeruginosa 
PAO1]
 gi|15597596|ref|NP_251090.1|  probable non-ribosomal peptide synthetase [Pseudomonas aeruginosa 
PAO1]
Length=1317

 Score = 2493 bits (6460),  Expect = 0.0
 Identities = 1310/1317 (99%), Positives = 1313/1317 (99%), Gaps = 0/1317 (0
Structural Features:
COG1020, EntF, Non-ribosomal peptide synthetase modules and related proteins [Secondary 
metabolites biosynthesis, transport, and catabolism].
             CD-Length = 642 residues,  97.2% aligned
             Score =  477 bits (1228), Expect = 6e-135

pfam00501, AMP-binding, AMP-binding enzyme.
             CD-Length = 412 residues, 100.0% aligned
             Score =  344 bits (884), Expect = 7e-95

COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary 
metabolites biosynthesis, transport, and catabolism].
             CD-Length = 534 residues,  90.3% aligned
             Score =  234 bits (597), Expect = 1e-61
Genomic Context:
Comment: