|
|
|
Modification Date/Time: | 2006-04-06 13:01:23 |
|
|
|
|
|
|
|
|
|
|
|
|
Missense Discrepancy: | FALSE |
|
Comments: Homology: PA2400 [gene=pvdJ] [prot=PvdJ], Length = 2157, Score = 4242 bits (11002), Expect = 0.0, Identities = 2146/2157 (99%), Positives = 2150/2157 (99%) |
Sequence:
ATGCTTTCCAATCCAAACCTGGACCTCGTGTCCCGCTTCGTTCGCCTGCCTCTGGCGCAGCAGAAATTGTTC
TATCAGCGTGTCCAGGCCAAGGGCATGAGCTTCGCCCGCCTGCCGATCCCGCAGACTCGCCAGGAGATGGAC
AACCTGCCGCTGTCCTATGCCCAAGAGCGGCAGTGGTTCCTCTGGCAGCTGGAGCCGGAGAGTTCCGCCTAC
CACATTCCTACCGCCCTGCGCCTGCGCGGTAGGTTGGACATTGCGTCCTTGCAGCGCAGCTTCGCGGCGCTC
GTCGAGCGGCACGAAAGCCTGCGCACGCGGATCGCGCGGATGGGTGATGAATGGGTGCAGGTCGTCTCCGCC
GACGTCTCGCTGGCGCTCGAAGTCGAAGTGCAACGGGGACTCGACGAACAGCGATTGCTGGAGCGGGTCGAG
GCGGAGATCGCACGACCCTTCGATCTCGAACAGGGACCGTTACTGCGGGTGACTTTGCTGGAGGTGGACGCC
GACGAGCATGTGCTGGTCATGGTCCAGCACCATATCGTCTCCGACGGTTGGTCGATGCAATTGATGGTCGAG
GAACTGGTCCAGCTCTATGCCGGCTACAGCCAAGGGCTCGACGTGGTGTTGCCGGCCCTGCCGATCCAGTAC
GCGGACTACGCCCTGTGGCAGCGCAGCTGGATGGAGGCGGGGGAAAAGGAGCGCCAGTTGGCGTACTGGACC
GGCCTGCTGGGCGGCGAGCAGCCGGTGCTGGAGTTGCCCCTCGATCACCCGCGGCAGCCGCTGCGCAGCTAT
CGTGGAGCGCAATTGGACCTGGAGCTGGAGCCACACCTGGCCCTTGCCTTGAAACAGCTGGTTCAGCGCAAG
GGTGTGACCATGTTCATGCTGTTGCTGGCTTCCTTCCAGGCGCTGTTGCATCGCTATAGCGGACAGGCGGAT
ATCCGTGTCGGCGTGCCGATCGCCAACCGTAACCGGGTTGAAACCGAGCGGATGATCGGTTTCTTCGTCAAC
ACCCAGGTGCTCAAGGCCGACATCAATGGCCGGATGGGTTTCGACGAGTTGCTGGCCCAGGCCCGCCAGCGC
GCGCTGGAGGCACAGGCGCACCAGGACCTGCCGTTCGAGCAACTGGTGGAGGCTTTGCAGCCGGAACGCAGC
CTCGGCCACAACCCGTTGTTCCAGGTCATGTTCAATCACCAGGCCGACTCTCGTTCGGCCAACCAGGGCGTG
CAACTGCCAGGCCTGTCGCTGGAGCGGATGGAGTGGCGGAGCAGCTCCGTGGCCTTCGACCTGACGCTGGAC
GTGCACGAGGCCGAGGACGGTATCTGGGCATCGTTCGGCTATGCCACGGATCTGTTCGAGGCCTCGACCGTC
GAGCGCCTGGCTCGGCACTGGCAGAATCTCCTGCGCGGCATCGTGGCCGAACCGGGCCGGCCGGTCGCCGAG
TTGCCGCTGTTGCTGGACGAGGAGCGCGATTGCCTGTTGCGGGCCTGGGCAGAGAACGCCGACGAGGGTGGG
TTGCCGCCCCTGGTCCAGTTGCAGATCCAGGAGCAGGCCCGTCTGCGTCCGCAGGCGCAAGCACTGGCGCTG
GAGGGGCAGGCGTTGAGCTACGCCGAGCTCAACGCCCGCGCCAATCGTCTGGCTCACTGCCTGATAGCGCGT
GGCGTCGGTCCCGATGTGCTGGTGGGAATCGCCGTCGAGCGCTCGCTGGACATGGTGGTCGGTCTGCTGGCG
ATCCTCAAGGCCGGTGGTGCCTATGTGCCGCTGGACCCGACCTATCCGCAGGACCGTTTGCGTCACATGCTC
GAGGACAGCGCCGTCGGCCTGTTGCTCAGCCAGGAGCATTTGCTGCCCGGGCTGCCTTTGCACGAAGGGCTG
GAGGTGCTCTCCATCGACCGCCTGGAACGGGACGCATCGGTGTCCACGGATGATCCGGTGGTGAACCTGCGG
CCGGAGAACCTGGCCTATGTGATCTACACCTCCGGCTCCACCGGAAAACCCAAGGGCGTGGCCATCAGCCAT
GCGGCGCTTGCGCAGTTCTCGCGTATCGCCAGTGGTTATTCCGCGCTCACCCCGGAGGATCGGATATTGCAG
TTCGCCACCCTGAGTTTCGACGGCTTCGTCGAACAGCTCTATCCGGCGCTGACCCGTGGTGCCTGCGTGGTC
CTGCGTGGCGGCGACCTCTGGGATACCGGTGAGCTGTATCGGCAGATAGTCGAGCAGGGCGTGACCCTTGCC
GACCTGCCCACGGCGTACTGGAACCTGTTCCTGCTCGATGCCCTGGCCGAGCCACGGCGTTCCTACGGTGCC
TTGCGGCAGATCCACATCGGTGGCGAAGCCATGCCACTGGAGGGGCCGAAGCTCTGGCGGCAAGCCGGCATG
GGCCGGGTGAGGTTGCTCAATACCTATGGACCGACCGAGGCCACGGTGGTGTCCAGCGTCTTCGATTGTTCC
GCCGAGAACGCCCGGGTGGGCAATGCCAGTCCTATCGGCCAGGCGCTACCCGGCCGTACGTTGCTGGTGCTG
GATGAACATCTCGGCCTACTGCCCGTAGGGGCGGTAGGCGAGCTTTATATCGCCAGCCGTGCCGGGCTGGCC
CGTGCCTACCACGATCGGCCCGGCTTGACCGCCGAGCGCTTCTTGCCCGACCCCTTCGGCGAACCGGGCTCG
AGGCTCTACCGGACCGGCGACCTGGCGCGCCGACGCGGTGACGGCGTGATCGAGTACATGGGGCGTGCCGAC
CATCAGGTGAAGATCCGCGGCTTCCGCATCGAGCTGGGGGAGGTCGAAGCCCGCCTCCTGGACTTGGAGGGA
ATACGCGAAGCGGCGGCTCTTGCGCTGGACGGTCAACTGGTGGCCTACCTGGTGGCTGAGGGGGGCGAGGAC
GAAACTCGCCAGCCGGCTTTGCGCGAGCGTATCCGCACAGCGCTACGGGCCTCGCTACCGGACTACATGGTG
CCCTCGCACCTGCTGTTCCTCGAGCGGATGCCGCTCAGTCCAAATGGCAAGCTGGACCGTCGGGCGCTGCCG
AAGCCGGATGCCGGCCTGATGCAACGCGACCACATGGCGCCGGCGAGCGCGCTGGAGAAAGATGTGGCCGCG
ATATGGGGCGAGTTGCTGGGCGTCGAACGGGTCGGCCTGACCGACAACTTCTTCGAATTGGGCGGACACTCG
CTGCTGGCGACGCGCCTGGTCTCGCGGATTCGCCAGGATCTCGGTATCGAAGTCAGCCTGAAGAGCCTTTTC
GAGCAGCCGGTCCTGCAGGGATTCGTCGAGAGCCTGGGCGAGAAACCGGCGGAGGTTCCGCCGATCACGCCC
GTTACCCGCGAGCAGCCGCTGCCGTTGTCCTATGCACAGGAGCGCCAGTGGTTCCTCTGGCAATTGGAACCG
GAGAGCGCGGCCTATCACATTCCCGCCGCCCTGCGCTTGCGCGGCGGCCTCGATGTCGTCGCGCTACAGCGC
AGTTTCGAGCGCCTTGCACAGCGTCACGAGTCGTTGCGTACCCGCTTCCGCCAGGAAGGCCTGCGTACCGTT
CAGGTGGTGGACGCCGATGGGCAGTTGCAGGTTTCCCGGCATAACCTGGCGAATGTCGATGACGCGTCGCTC
AGGGCGGCAGTCGAAGCGGAGATGGCCAGGCCCTTCGACCTACGGACGGATGCGTTGCTGCGGATCAGTCTG
TTCGAAGTGGCTCCGAATGACCATGTGCTGGTCATGGTCCAGCACCATATCGTCTCCGACGGTTGGTCGATG
CAGTTGATGGTCGAAGAGCTGGTCCAGCTCTATGCCGCCTACAGCCAGGGGCGCGAAGCGGCCCTGCCGGCG
CTGCCGATACAGTATCCGGACTATGCCGTCTGGCAGCGCGAATGGATGGAGGCCGGAGAGAGGGAGCGCCAG
TTGGCGTACTGGATCGGCCTGCTGGGTGGCGAACAGCCGGTGCTGGAGCTGCCGTTCGATCGTCCCCGTCCT
GCGGAGCAGAGCTTTCGCGGCGCGCGGCTGGAGTTCGAACTCGGCGCCGAGCGGGCCAGGCGGCTGAAGGCG
CTTGCCCAGCGGCAGGGTGCGAGTACCTTCATGTTGCTGCTGGCATCGTTCCAGGCGCTGCTGTATCGCTAC
AGCGGTCAGTCGGATATCCGTGTCGGCGTGCCGGTCGCCAATCGCAACCGGGTCGAAACCGAGCGACTGATC
GGGTTCTTCGTCAACACCCAGGTGCTCAAGGCCGACATCGATGGGCAGATGGGGTTCGAGCGATTGCTGCAC
CAGGTTCGCCAGCGCTCGCTGGAGGCGCAGGCGCACCAGGACTTGCCGTTCGAGCAACTGGTGGAAGCCTTG
CAACCGGAGCGCAGTCTCAGCCACAGCCCGCTGTTCCAGGTGCTATTCAACTACCAGGCGGAGCGGGGCGAG
CACGGCTTGCCGGAAGTCGCGGGACTGAGCATCGAAGAGCAGGCGTGGGAAAGCCATACGGCGCAGTTCGAC
CTGGTGCTGGATACCTGTGAGTCCGAGTCGGACATCTGGGCGGCGCTGGTCTATGCGACCGATCTATTCGAT
GCTTCGACCGCAGAGCGCCTGGTACGGCATTGGCAGAATCTGCTGGATGCGATCCTGGCGATGCCTGACGCT
CGCCTGGGAGAGCTGGACATGCTCGACCGCGAGGAGCGCGAAGTCATCGGGCAGCTCTGGAACCGCAGCGAC
TCGGGCTATCCGGCAACGCCGCTGGTACACCAGCGAGTGGCCGAGCGGGCGCGTATGGCGCCGGATGCGGTG
GCGGTGATCTTCGACGAGGAAAAGCTCACCTACGCCGAGCTGGATAGCCGGGCCAACCGCCTGGCCCATGCG
TTGATCGCCCTAGGCGTCGGCCCCGAGGTGCGGGTGGCGATCGCCATGCAGCGCAGCGCGGAGATCATGGTG
GCGTTCCTGGCGGTACTGAAGGCCGGCGGCGCCTACGTGCCGCTGGATATCGAATACCCGCGCGAGCGCCTG
CTGTACATGATGCAGGACAGTCGCGCGCACCTGCTGCTGACCCATAGCCACCTGCTGGAGCTTCTGCCGATC
CCCGAGGGGTTGTCCTGCCTGTCCGTGGATCGCGAGGAGGAGTGGGCCGGCTTCCCCGCCCATGATCCAGAG
GTGGCGCTGCACGGCGACAACCTGGCCTATGTGATCTACACCTCCGGCTCCACCGGCATGCCCAAGGGCGTG
GCGGTGCCCCACGGTCCGCTGATCGCCCATATCGTGGCTACCGGCGAGCGCTACGAGATGACCCCGGAGGAC
TGCGAGCTGCACTTCATGTCGTTCGCCTTCGACGGTTCCCACGAAGGCTGGATGCACCCGTTGATCAACGGC
GCGCGGGTGCTGATCCGCGACGACAGCCTGTGGCTGCCGGAACGGACCTACGCCGAGATGCATCGCCACGGG
GTAACGGTGGGGGTGTTCCCGCCGGTGTACCTGCAGCAACTGGCCGAGCATGCCGCGCGCGACGGCAATCCG
CCGCCGGTACGGGTCTACTGCTTCGGCGGCGACGCGGTGGCGCAGGCCAGCTATGACCTGGCGTGGCGGGCG
CTGAAGCCGAAGTACCTGTTCAACGGCTACGGCCCGACCGAGACGGTGGTGACGCCGCTGCTGTGGAAAGCG
CGAGCGGGCGATGCCTGCGGCGCGGCCTACATGCCGATCGGTACGCTGCTGGGCAACCGTAGCGGCTACATC
CTCGACGGGCAGTTGAACCTGCTGCCGGTAGGCGTGGCGGGCGAACTGTACCTGGGCGGGGAAGGGGTGGCG
CGCGGCTACCTGGAGCGTCCGGCGCTGACCGCCGAGCGTTTCGTGCCGGATCCCTTTGGTGCGCCGGGCAGC
CGGCTGTACCGCAGCGGCGACCTGACCCGTGGGCGTGCGGATGGGGTGGTGGATTACCTCGGACGGGTGGAT
CACCAGGTGAAGATCCGAGGCTTCCGCATCGAACTGGGAGAGATCGAGGCGCGCCTGCGCGAGCATCCGGCG
GTGCGCGAGGCGGTGGTGGTGGCCCAGCCGGGCGCGGTGGGCCAGCAGTTGGTGGGCTACGTGGTGGCGCAG
GAGCCGGCGGTCGCGGATTCGCCGGAAGCGCAGGCGGAGTGCCGGGCGCAGTTGAAGACGGCGCTGCGCGAG
CGCCTGCCGGAATACATGGTGCCGTCGCACCTGTTGTTCCTGGCGCGGATGCCGCTGACGCCGAACGGCAAG
CTGGACCGCAAGGGCCTGCCACAGCCGGATGCGAGCCTGTTGCAGCAGGTCTACGTGGCGCCGCGAAGCGAT
CTGGAGCAACAGGTCGCGGGGATCTGGGCGGAGGTCCTGCAATTGCAACAGGTCGGGCTCGACGACAACTTC
TTCGAACTCGGCGGCCACTCGTTGCTGGCCACCCAGGTCATTGGCCGCCTACGCGAACGACTGCACCTGGAG
GTGCCGATCAAGTCGATGTTCACCGCGGAGACACTGGGTGAGTTCTGCCACGGCGTCGAGACCCTCAAGGCC
GAGAGCGCGCCGGTGGAAGATGCCCTGGCTAAATCCCTGGAGGCGCTCAAACGTCTATCTGCCGATGAACTT
GAAAAACTGATTTCCTAA |
Translation:
MLSNPNLDLVSRFVRLPLAQQKLFYQRVQAKGMSFARLPIPQTRQEMDNLPLSYAQERQWFLWQLEPESSAY
HIPTALRLRGRLDIASLQRSFAALVERHESLRTRIARMGDEWVQVVSADVSLALEVEVQRGLDEQRLLERVE
AEIARPFDLEQGPLLRVTLLEVDADEHVLVMVQHHIVSDGWSMQLMVEELVQLYAGYSQGLDVVLPALPIQY
ADYALWQRSWMEAGEKERQLAYWTGLLGGEQPVLELPLDHPRQPLRSYRGAQLDLELEPHLALALKQLVQRK
GVTMFMLLLASFQALLHRYSGQADIRVGVPIANRNRVETERMIGFFVNTQVLKADINGRMGFDELLAQARQR
ALEAQAHQDLPFEQLVEALQPERSLGHNPLFQVMFNHQADSRSANQGVQLPGLSLERMEWRSSSVAFDLTLD
VHEAEDGIWASFGYATDLFEASTVERLARHWQNLLRGIVAEPGRPVAELPLLLDEERDCLLRAWAENADEGG
LPPLVQLQIQEQARLRPQAQALALEGQALSYAELNARANRLAHCLIARGVGPDVLVGIAVERSLDMVVGLLA
ILKAGGAYVPLDPTYPQDRLRHMLEDSAVGLLLSQEHLLPGLPLHEGLEVLSIDRLERDASVSTDDPVVNLR
PENLAYVIYTSGSTGKPKGVAISHAALAQFSRIASGYSALTPEDRILQFATLSFDGFVEQLYPALTRGACVV
LRGGDLWDTGELYRQIVEQGVTLADLPTAYWNLFLLDALAEPRRSYGALRQIHIGGEAMPLEGPKLWRQAGM
GRVRLLNTYGPTEATVVSSVFDCSAENARVGNASPIGQALPGRTLLVLDEHLGLLPVGAVGELYIASRAGLA
RAYHDRPGLTAERFLPDPFGEPGSRLYRTGDLARRRGDGVIEYMGRADHQVKIRGFRIELGEVEARLLDLEG
IREAAALALDGQLVAYLVAEGGEDETRQPALRERIRTALRASLPDYMVPSHLLFLERMPLSPNGKLDRRALP
KPDAGLMQRDHMAPASALEKDVAAIWGELLGVERVGLTDNFFELGGHSLLATRLVSRIRQDLGIEVSLKSLF
EQPVLQGFVESLGEKPAEVPPITPVTREQPLPLSYAQERQWFLWQLEPESAAYHIPAALRLRGGLDVVALQR
SFERLAQRHESLRTRFRQEGLRTVQVVDADGQLQVSRHNLANVDDASLRAAVEAEMARPFDLRTDALLRISL
FEVAPNDHVLVMVQHHIVSDGWSMQLMVEELVQLYAAYSQGREAALPALPIQYPDYAVWQREWMEAGERERQ
LAYWIGLLGGEQPVLELPFDRPRPAEQSFRGARLEFELGAERARRLKALAQRQGASTFMLLLASFQALLYRY
SGQSDIRVGVPVANRNRVETERLIGFFVNTQVLKADIDGQMGFERLLHQVRQRSLEAQAHQDLPFEQLVEAL
QPERSLSHSPLFQVLFNYQAERGEHGLPEVAGLSIEEQAWESHTAQFDLVLDTCESESDIWAALVYATDLFD
ASTAERLVRHWQNLLDAILAMPDARLGELDMLDREEREVIGQLWNRSDSGYPATPLVHQRVAERARMAPDAV
AVIFDEEKLTYAELDSRANRLAHALIALGVGPEVRVAIAMQRSAEIMVAFLAVLKAGGAYVPLDIEYPRERL
LYMMQDSRAHLLLTHSHLLELLPIPEGLSCLSVDREEEWAGFPAHDPEVALHGDNLAYVIYTSGSTGMPKGV
AVPHGPLIAHIVATGERYEMTPEDCELHFMSFAFDGSHEGWMHPLINGARVLIRDDSLWLPERTYAEMHRHG
VTVGVFPPVYLQQLAEHAARDGNPPPVRVYCFGGDAVAQASYDLAWRALKPKYLFNGYGPTETVVTPLLWKA
RAGDACGAAYMPIGTLLGNRSGYILDGQLNLLPVGVAGELYLGGEGVARGYLERPALTAERFVPDPFGAPGS
RLYRSGDLTRGRADGVVDYLGRVDHQVKIRGFRIELGEIEARLREHPAVREAVVVAQPGAVGQQLVGYVVAQ
EPAVADSPEAQAECRAQLKTALRERLPEYMVPSHLLFLARMPLTPNGKLDRKGLPQPDASLLQQVYVAPRSD
LEQQVAGIWAEVLQLQQVGLDDNFFELGGHSLLATQVIGRLRERLHLEVPIKSMFTAETLGEFCHGVETLKA
ESAPVEDALAKSLEALKRLSADELEKLIS* |
AnnotationID:7345 | GeneID:7197 |
|
Modification Date/Time: |
2006-03-16 17:05:35 |
|
|
|
|
|
|
Cell Localization Confidence Code: | 5 |
|
|
Functional Category: | (1) Adaptation, protection |
|
Alternate Gene Product Name: | |
|
Functional Category Confidence Code: | 5 |
|
|
Secondary Functional Category(ies): | |
|
|
|
|
Homology: | gi|60279950|gb|AAX16296.1| PvdJ [Pseudomonas aeruginosa]
Length=2189
Score = 4056 bits (10520), Expect = 0.0
Identities = 2179/2189 (99%), Positives = 2184/2189 (99%), Gaps = 0/2189 (0%)
gi|9948442|gb|AAG05788.1| probable non-ribosomal peptide synthetase [Pseudomonas aeruginosa
PAO1]
gi|15597596|ref|NP_251090.1| probable non-ribosomal peptide synthetase [Pseudomonas aeruginosa
PAO1]
Length=1317
Score = 2493 bits (6460), Expect = 0.0
Identities = 1310/1317 (99%), Positives = 1313/1317 (99%), Gaps = 0/1317 (0 |
|
Structural Features: | COG1020, EntF, Non-ribosomal peptide synthetase modules and related proteins [Secondary
metabolites biosynthesis, transport, and catabolism].
CD-Length = 642 residues, 97.2% aligned
Score = 477 bits (1228), Expect = 6e-135
pfam00501, AMP-binding, AMP-binding enzyme.
CD-Length = 412 residues, 100.0% aligned
Score = 344 bits (884), Expect = 7e-95
COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary
metabolites biosynthesis, transport, and catabolism].
CD-Length = 534 residues, 90.3% aligned
Score = 234 bits (597), Expect = 1e-61 |
|
|
|
|
|