ViewGene

Locus Name:
GeneID:
Location:

GeneID:7189
TrivialName: PA14_08110
AnnotatorUID: danlee
Modification Date/Time:2006-05-02 14:02:59
LocusName:PA14_08110
PAO1 Ortholog Locus:
Sequence Length:111
Protein Length:36
Start: 696088
Stop: 696198
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: dbj|BAA83163.1| (AB030825) hypothetical protein [Pseudomonas aeruginosa]
Identities = 35/36 (97%), Positives = 35/36 (97%)
Sequence:
ATGCGTCAACTGGCGAGGCGCCTGGCCATTGAGCTGGGCTTCCAGGCCAGCGAACTGGAGCGCATGACCCTG
GGCGACCTGCTCTGGTGGCTCGCCGAGGGCGAGGAGTGA
Translation:
MRQLARRLAIELGFQASELERMTLGDLLWWLAEGEE*
AnnotationID:7189GeneID:7189
AnnotatorUID: danlee
Modification Date/Time: 2006-05-02 14:02:48
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
gi|5725165|dbj|BAA83163.1|  hypothetical protein [Pseudomonas aeruginosa]
Length=36

 Score = 73.2 bits (178),  Expect = 3e-12
 Identities = 35/36 (97%), Positives = 35/36 (97%), Gaps = 0/36 (0%)
Structural Features:
CDD Search: No hits at any threshold.
Genomic Context:
Comment:
ReferenceID:14012
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31446
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50191How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6497431Stop: 6497541
Length: 111
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGCGTCAACTGGCGAGGCGCCTGGCCATTGAGCTGGGCTTCCAGGCCAGCGAACTGGAGCGCATGACCCTG
GGCGACCTGCTCTGGTGGCTCGCCGAGGGCGAGGAGTGA