ViewGene

Locus Name:
GeneID:
Location:

GeneID: 7176

TrivialName: PA14_07460

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_07460

PAO1 Ortholog Locus:

Sequence Length: 162

Protein Length: 53

Start: 640278

Stop: 640117

Strand: -

Type:

ChromosomeID: 2

Status: ACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAO54077.1| (AE016857) site-specific recombinase, phage integrase family [Pseudomonas syringae pv. tomato str. DC3000] Identities = 31/34 (91%), Positives = 32/34 (94%)

Sequence:

ATGGCAACAATCGCCCCTCCTTCCCGTGGTCCGCAAAACGGATTGGCCGACCAACGAAAAACCTTCCGCACC
AAGCGCGACGCCGAAGACTGGGCACGCCGCACCGAAGACGAGATGGTACGCGGCGTGTACATCCAGCACTGC
GGCTCCGAGCGCATGTGA

Translation:

MATIAPPSRGPQNGLADQRKTFRTKRDAEDWARRTEDEMVRGVYIQHCGSERM*

AnnotationID:7176 GeneID:7176

AnnotatorUID: danlee

Modification Date/Time: 2005-10-05 15:03:16

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

gi|33567087|emb|CAE31000.1|  putative integrase [Bordetella bronchiseptica RB50]
     Length=121
     Score = 67.8 bits (164),  Expect = 1e-10
     Identities = 37/59 (62%), Positives = 39/59 (66%), Gaps = 6/59 (10%)

Structural Features:

Genomic Context:

Comment:

ReferenceID:13990

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:31421