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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG04735.1|AE004564_4 (AE004564) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 513/515 (99%), Positives = 514/515 (99%)
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Sequence:
ATGTCTCGAAACAATCCTTCGCGTCATTCAATACTCGTCACTTCCAACATAAACGCGGCCAATGATGCGAAT
CGTCTTTCCGAGCTTTGTCGACAACTGGAAATACGCGGCTATCGGCTCTTCCAGGCGCCAAGCCGCAAGGTC
GCCCTGGATTTTCTCGGCAACGCCGCGCACCCCGCCGGCATCCTCCTGCTCGTCGCGGAGCCGACAGGCGAG
AACGAGGCCGCACAATTGTCGGCCCTCGATGAACTCCGCCAGGTCGCGCCGTCCATCCCGCTGTTCCTGTTG
TTTCGTCAACTGCGCATCGAGCAGTTGTCCAGCCAGCTACTGGACGAGGTCCAGGGATGCTTCAACCTGGCC
GCCGGCCCCGCACGCTTCATCGCCGAGCGCATCGACAGCGACCTGCGCGAATGGCGCGCCCCGGCGGGCCCC
AGGCGGCTGCGCGACTATGCCCCGCCGGTCCCGCGCACGCCGGTGAGCGCCCGCTACAACGGCCGCGCACGC
CTCGATCTGGCGCCGGCCAAGCAGTGGCGGATCGGCTCGGGGAGCACCGCGGAGCGCCTGGCGACGCCGCTG
AACGACCTCTCCACGGCCTACCGCAAGACGTCCGCAGGAGCCCCGGCGGCGCACGCCGGCGACATCGCCGAG
GCCTTTCGCCGGGCGCTCTGGGAAGCCGCCGCGCGGCTCGCCAGGGAGGATGGCGATACGTGGTTCTTCGAG
ATACTGCGGGGCAACCCGGGGCCTGGCATCGAGGCCGGCCGGGAGACGCCGGCGAAGCGCTGGCACGGGCTC
GCCGAGACACTCGACAGCAGTCCTCGGCTGGACCCGCTGCGCGTCGCCCTGAGCGCCCCCGGCCTCGATTCG
CGCGGTCGCCCGGCCAGCTTCGGAGTACCCGCCGCGGTGGTCTGCCGCTACCTGCGCCGGCACGGCATCGCC
CCGTTGCGCACCGGCGACTATCGCTTCCTGCTGCTGTTTCCCCAGGGCGCCAGGGCGGAACACGCGCAGCCG
CTGGTGGACAGGCTGTGCGAATTCAAACGCCGGCACGACGACGATGCGCCGCTGAAGCAGGTGTTGCCGGAG
TTGCTCGACAGCTCGCCGCTGTACCGCTACATCGGCCTGCGCGAACTCTGCGCGATGATCCACGAAGCCAGC
CTGCGGCTGCACCTGACCGCCCTCGCCGACGCCGCCGCCAGGGCTGCCGGCCACGCCGCGCTGGCGCCGGCC
ACGGTCTATGGGCACCTGGTCAGGGACGAAACCGAAGCGGTGGCGATCGACAGGCTCGGCGGCCGTGTGGTC
GCCAGCCTGGTCGGCGTCCATCCGGCGGCCACACCGCTGCTATTGCCCGGCGAACGGGTGGCCGAGGAATCG
CCGGCACTGATCGACTACCTGCTGGCCTTGCAGGCCTTCGGCGAGCACTTTCCCGGTTTCGCTCCCGAGTTG
CAGGGCATCGAGATCGATGAGCGCGGCCGCTACCGGGTCCGTTGCGTCAGGCCGGCCGCCCTCGCCCGCGGC
TCCGGCCTGCGCCTGGCCACGCGCCGGCCGGACTGA |
Translation:
MSRNNPSRHSILVTSNINAANDANRLSELCRQLEIRGYRLFQAPSRKVALDFLGNAAHPAGILLLVAEPTGE
NEAAQLSALDELRQVAPSIPLFLLFRQLRIEQLSSQLLDEVQGCFNLAAGPARFIAERIDSDLREWRAPAGP
RRLRDYAPPVPRTPVSARYNGRARLDLAPAKQWRIGSGSTAERLATPLNDLSTAYRKTSAGAPAAHAGDIAE
AFRRALWEAAARLAREDGDTWFFEILRGNPGPGIEAGRETPAKRWHGLAETLDSSPRLDPLRVALSAPGLDS
RGRPASFGVPAAVVCRYLRRHGIAPLRTGDYRFLLLFPQGARAEHAQPLVDRLCEFKRRHDDDAPLKQVLPE
LLDSSPLYRYIGLRELCAMIHEASLRLHLTALADAAARAAGHAALAPATVYGHLVRDETEAVAIDRLGGRVV
ASLVGVHPAATPLLLPGERVAEESPALIDYLLALQAFGEHFPGFAPELQGIEIDERGRYRVRCVRPAALARG
SGLRLATRRPD* |
AnnotationID:724 | GeneID:715 |
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Modification Date/Time: |
2005-02-23 08:08:57 |
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GeneProduct: | putative lysine decarboxylase |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (2) Amino acid biosynthesis and metabolism |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAL19198.1| (AE008705) lysine decarboxylase 2, constitutive [Salmonella
typhimurium LT2]
Length = 713
Score = 180 bits (457), Expect = 2e-44
Identities = 94/270 (34%), Positives = 151/270 (55%), Gaps = 1/270 (0%)
>gb|AAN78716.1|AE016755_216 (AE016755) Lysine decarboxylase, constitutive [Escherichia coli
CFT073]
Length = 713
Score = 173 bits (439), Expect = 2e-42
Identities = 93/270 (34%), Positives = 149/270 (55%), Gaps = 1/270 (0%)
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Structural Features: | COG1982, LdcC, Arginine/lysine/ornithine decarboxylases
[Amino acid transport and metabolism]
CD-Length = 557 residues, 91.2% aligned
Score = 392 bits (1008), Expect = 5e-110
Identities = 157/523 (30%), Positives = 216/523 (41%), Gaps = 37/523 (7%)
pfam03711, OKR_DC_1_C, Orn/Lys/Arg decarboxylase, C-terminal domain.
CD-Length = 135 residues, 100.0% aligned
Score = 86.9 bits (215), Expect = 5e-18
Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
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