ViewGene

Locus Name:
GeneID:
Location:

GeneID:714
TrivialName: PA14_36050
AnnotatorUID: ericdeziel
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_36050
PAO1 Ortholog Locus:PA2217
Sequence Length:1584
Protein Length:527
Start: 3211497
Stop: 3209914
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG05605.1|AE004648_4 (AE004648) probable aldehyde dehydrogenase [Pseudomonas aeruginosa PAO1]
Identities = 519/526 (98%), Positives = 523/526 (99%) to PA2217 of PAO1.
Sequence:
ATGACAGCCATCCTCGGACACAACTTCATCGGCGGCGCCCGCAGCGCGGCCGGCACGCTCTTCCTGCAAAGC
CTCGACGCCGCCAGCGGTGAGGCGCTGCCGTACCGCTTCGTGCAAGCCACCCCGGAAGAAGTGGACGCCGCC
GCCGAGGCCGCCGCCAGCGCCTACCCGCACTACCGGCAACTGCCAGCCAGCCGCCGCGCGGAATTCCTCGAT
ACCATCGCCGCCGAACTCGACGCACTGGACGATGATTTCGTCGCCATCGTCTGCCGTGAAACCGCGCTACCG
GCCACGCGCATCCAGGGCGAACGCAGCCGCACCAGCGGCCAGCTGCGCCTGTTCGCCGAAGTCCTGCGGCGC
GGCGACTTCCATGGCGCGCGCATCGACCGCGCCCGGCCCGAACGCAAGCCGCTGCCACGCGTCGACCTGCGC
CAGTGCCGGATCGGCCTCGGCCCGGTGGCGGTGTTCGGCGCGAGCAACTTCCCCCTGGCGTTCTCCACCGCC
GGCGGCGATACCGCCGCGGCCCTGGCCGCCGGCTGCCCGGTGGTGTTCAAGGCGCACAGCGGACACATGGCC
ACCGCCGAACGGGTCGCCGCAGCGATCCTCCGCGCGGCCGAGCGCACCGGCATGCCGGCGGGCGTGTTCAAC
ATGATCTACGGCGGTGGAGTAGGGGAGCGGCTGGTCCGCCACCCCGCGATCCAGGCGGTCGGCTTCACCGGT
TCGCTGAAGGGCGGCCGCGCCCTTTGCGACATGGCGGCCGCCCGGGCGCAGCCGATCCCGGTGTTCGCCGAG
ATGAGCAGCATCAACCCGGTGGTCCTGCTGCCCGCCGCGCTGCAAGGCCGAGGCGAGGCCGTGGCCGACGAA
CTGAGTGCCTCGGTGGTGCTCGGCTGCGGCCAGTTCTGTACCAaTcccgGGCTGGTCATCGGCATCCGCTCT
GCGCAATTctcggcgttCCtcGAACGcttcgccgCCCGCATGGACGACCAGCCGGCGCAGACCATGCTCAAC
GCCGGCACGCTGGCCAGCTATGAAAAAGGCCTGGCGGCGCTGCACGCCCACCCGCGCGTCCGCCATCTCGCC
GGGCAACCGCAGGAGGGCCGCCAGGCCCGGCCGCAACTGTTCCAGGCGGACGTCAGCCTGCTGCTGGAGGGC
GACGAGTTGCTGCAGGAAGAAGTCTTCGGCCCGGCCAGCGTGGTCGTCGAGGTCGCCGACCACGCCGAACTG
AAGCGCGCGCTGCATGGGCTGCACGGGCAGCTCACCGCGACCCTGATCGCCGAAGCGGAAGACCTGGCGTCC
TTCGCCGACCTGGTACCGCTCCTGGAACAGAAGGCAGGGCGCCTGCTGCTCAACGGCTATCCGACCGGCGTG
GAAGTCTGCGACGCGATGGTCCACGGCGGTCCGTACCCGGCCACCTCGGACGCCCGAGGCACCTCGGTGGGC
ACCCTGGCCATCGAGCGTTTCCTGCGCCCGGTGTGCTACCAGAACTACCCGGACGCGTGGCTGCCGGAAGCG
CTGAAGGATGGCAACCCATTGGGGATTGCGCGGTTGGTGGACGGGGTTGAGACGCGGGCGGCGATTGACTGA
Translation:
MTAILGHNFIGGARSAAGTLFLQSLDAASGEALPYRFVQATPEEVDAAAEAAASAYPHYRQLPASRRAEFLD
TIAAELDALDDDFVAIVCRETALPATRIQGERSRTSGQLRLFAEVLRRGDFHGARIDRARPERKPLPRVDLR
QCRIGLGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVFKAHSGHMATAERVAAAILRAAERTGMPAGVFN
MIYGGGVGERLVRHPAIQAVGFTGSLKGGRALCDMAAARAQPIPVFAEMSSINPVVLLPAALQGRGEAVADE
LSASVVLGCGQFCTNPGLVIGIRSAQFSAFLERFAARMDDQPAQTMLNAGTLASYEKGLAALHAHPRVRHLA
GQPQEGRQARPQLFQADVSLLLEGDELLQEEVFGPASVVVEVADHAELKRALHGLHGQLTATLIAEAEDLAS
FADLVPLLEQKAGRLLLNGYPTGVEVCDAMVHGGPYPATSDARGTSVGTLAIERFLRPVCYQNYPDAWLPEA
LKDGNPLGIARLVDGVETRAAID*
AnnotationID:723GeneID:714
AnnotatorUID: ericdeziel
Modification Date/Time: 2003-11-15 19:07:39
Gene Name:PA2217
Confidence Code:3
GeneProduct:Probable NAD-dependent aldehyde dehydrogenase
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(12) Energy metabolism
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:1012.1
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:1431
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:18573
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
Homologs By Global Alignment
Gene ID:714

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
1225 PA2217_tr translation of PA2217 527 98.48 99.24 0 2638.0
46755 gb|AAG05605.1|AE004648_4 (AE004648) probable aldehyde dehydrogenase [Pseudomonas aeruginosa PAO1] 527 98.48 99.24 0 2638.0
1226 PA1253_tr translation of PA1253 527 76.66 85.19 1 2046.0
46756 gb|AAG04642.1|AE004555_2 (AE004555) probable semialdehyde dehydrogenase [Pseudomonas aeruginosa PAO1] 527 76.66 85.19 1 2046.0
46757 gb|AAN69202.1|AE016554_9 (AE016787) ketoglutarate semialdehyde dehydrogenase [Pseudomonas putida KT2440] 527 75.14 83.11 1 1989.0
GC ORFID: 43716How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA2217Glimmer Score:
Start: 1742419Stop: 1744002
Length: 1584
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA2217 translation of PA2217Homolog Bit Score 1021.0
Other Homologs: t_PA1253 (ORF: BLASTX 791.0), t_PA2217 (ORF: GLIMMER)
GC ORF Sequence
ATGACAGCCATCCTCGGACACAACTTCATCGGCGGCGCCCGCAGCGCGGCCGGCACGCTCTTCCTGCAAAGC
CTCGACGCCGCCAGCGGTGAGGCGCTGCCGTACCGCTTCGTGCAAGCCACCCCGGAAGAAGTGGACGCCGCC
GCCGAGGCCGCCGCCAGCGCCTACCCGCACTACCGGCAACTGCCAGCCAGCCGCCGCGCGGAATTCCTCGAT
ACCATCGCCGCCGAACTCGACGCACTGGACGATGATTTCGTCGCCATCGTCTGCCGTGAAACCGCGCTACCG
GCCACGCGCATCCAGGGCGAACGCAGCCGCACCAGCGGCCAGCTGCGCCTGTTCGCCGAAGTCCTGCGGCGC
GGCGACTTCCATGGCGCGCGCATCGACCGCGCCCGGCCCGAACGCAAGCCGCTGCCACGCGTCGACCTGCGC
CAGTGCCGGATCGGCCTCGGCCCGGTGGCGGTGTTCGGCGCGAGCAACTTCCCCCTGGCGTTCTCCACCGCC
GGCGGCGATACCGCCGCGGCCCTGGCCGCCGGCTGCCCGGTGGTGTTCAAGGCGCACAGCGGACACATGGCC
ACCGCCGAACGGGTCGCCGCAGCGATCCTCCGCGCGGCCGAGCGCACCGGCATGCCGGCGGGCGTGTTCAAC
ATGATCTACGGCGGTGGAGTAGGGGAGCGGCTGGTCCGCCACCCCGCGATCCAGGCGGTCGGCTTCACCGGT
TCGCTGAAGGGCGGCCGCGCCCTTTGCGACATGGCGGCCGCCCGGGCGCAGCCGATCCCGGTGTTCGCCGAG
ATGAGCAGCATCAACCCGGTGGTCCTGCTGCCCGCCGCGCTGCAAGGCCGAGGCGAGGCCGTGGCCGACGAA
CTGAGTGCCTCGGTGGTGCTCGGCTGCGGCCAGTTCTGTACCAaTcccgGGCTGGTCATCGGCATCCGCTCT
GCGCAATTctcggcgttCCtcGAACGcttcgccgCCCGCATGGACGACCAGCCGGCGCAGACCATGCTCAAC
GCCGGCACGCTGGCCAGCTATGAAAAAGGCCTGGCGGCGCTGCACGCCCACCCGCGCGTCCGCCATCTCGCC
GGGCAACCGCAGGAGGGCCGCCAGGCCCGGCCGCAACTGTTCCAGGCGGACGTCAGCCTGCTGCTGGAGGGC
GACGAGTTGCTGCAGGAAGAAGTCTTCGGCCCGGCCAGCGTGGTCGTCGAGGTCGCCGACCACGCCGAACTG
AAGCGCGCGCTGCATGGGCTGCACGGGCAGCTCACCGCGACCCTGATCGCCGAAGCGGAAGACCTGGCGTCC
TTCGCCGACCTGGTACCGCTCCTGGAACAGAAGGCAGGGCGCCTGCTGCTCAACGGCTATCCGACCGGCGTG
GAAGTCTGCGACGCGATGGTCCACGGCGGTCCGTACCCGGCCACCTCGGACGCCCGAGGCACCTCGGTGGGC
ACCCTGGCCATCGAGCGTTTCCTGCGCCCGGTGTGCTACCAGAACTACCCGGACGCGTGGCTGCCGGAAGCG
CTGAAGGATGGCAACCCATTGGGGATTGCGCGGTTGGTGGACGGGGTTGAGACGCGGGCGGCGATTGACTGA