ViewGene

Locus Name:
GeneID:
Location:

GeneID: 7117

TrivialName: PA14_04830

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_04830

PAO1 Ortholog Locus:

Sequence Length: 411

Protein Length: 136

Start: 427014

Stop: 426604

Strand: -

Type:

ChromosomeID: 2

Status: ACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAK99041.1| (AE008404) Conserved hypothetical protein [Streptococcus pneumoniae R6] Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 4/110 (3%)

Sequence:

ATGGAACTGACGCTGCGGCACAACCCGATGCTCGACGACGCCGACTGCGAGGCGATCCTGGCGATCCACGCG
GCGGTCGGCTGGGACCGGCGCATGCCGCCTGCCGAGCTACGCACGCTGTACCAGCATTCCGGCTATTCCCTG
CTGGCCGAACGCGACGGCCGCCTGGTCGGCCTGCTGCGCGCCGAGGAAGAAACACCGATTCGCGTCTGGCTG
GCGGAAATCGCCGTGCTGCCCGGCGCACAGCGCAGCGGCGTCGGCGCAGCCCTGCTGCGGCGCTTCGCCGAG
GATCACCGCGGCGCCTACCTGTTCACCGACGCCACCCTCGGTACCGAAGCCTTCTTCCGCCGCCACGGCATC
CACATCCAGCAGGTGCTGGAGAAAACCCTGCGCGATCAGAGCGGCACGTAG

Translation:

MELTLRHNPMLDDADCEAILAIHAAVGWDRRMPPAELRTLYQHSGYSLLAERDGRLVGLLRAEEETPIRVWL
AEIAVLPGAQRSGVGAALLRRFAEDHRGAYLFTDATLGTEAFFRRHGIHIQQVLEKTLRDQSGT*

AnnotationID:7117 GeneID:7117

AnnotatorUID: diggins

Modification Date/Time: 2005-03-25 05:05:13

Gene Name:

Confidence Code: 3

GeneProduct: putative acetyltransferase

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (27) Transport of small molecules

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

>gb|AAK74435.1| (AE007338) acetyltransferase, GNAT family [Streptococcus pneumoniae
           TIGR4]
          Length = 138

 Score = 48.1 bits (113), Expect = 8e-06
 Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 4/117 (3%)

Structural Features:

Genomic Context:

Comment:

ReferenceID:13890

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:31306

Author/Investigator(s): GenNotator

Title: CDD Search

PubMed:

MedLine:

Source:

Reference Type: RPSBLAST

Data:

URL:

ReferenceID:33703

Author/Investigator(s):

Title: CDD Search

PubMed:

MedLine:

Source:

Reference Type: Misc (text/plain)

Data: 7117_cdd.html

URL:

GC ORFID: `50119`	How Found: `Glimmer`
GC_TrimmedSeqID: `69`	Blast Result ID
Subject Sequence Name:	Glimmer Score:
Start: `6228356`	Stop: `6227946`
Length: `411`
Start Codon: `ATG`	Truncated Start:
Stop Codon: `TAG`	Truncated Stop:
Homolog:	Homolog Bit Score
Other Homologs:
GC ORF Sequence
`ATGGAACTGACGCTGCGGCACAACCCGATGCTCGACGACGCCGACTGCGAGGCGATCCTGGCGATCCACGCG GCGGTCGGCTGGGACCGGCGCATGCCGCCTGCCGAGCTACGCACGCTGTACCAGCATTCCGGCTATTCCCTG CTGGCCGAACGCGACGGCCGCCTGGTCGGCCTGCTGCGCGCCGAGGAAGAAACACCGATTCGCGTCTGGCTG GCGGAAATCGCCGTGCTGCCCGGCGCACAGCGCAGCGGCGTCGGCGCAGCCCTGCTGCGGCGCTTCGCCGAG GATCACCGCGGCGCCTACCTGTTCACCGACGCCACCCTCGGTACCGAAGCCTTCTTCCGCCGCCACGGCATC CACATCCAGCAGGTGCTGGAGAAAACCCTGCGCGATCAGAGCGGCACGTAG`