ViewGene

Locus Name:
GeneID:
Location:

GeneID: 7075

TrivialName: PA14_03370

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_03370

PAO1 Ortholog Locus:

Sequence Length: 999

Protein Length: 332

Start: 308983

Stop: 307985

Strand: -

Type:

ChromosomeID: 2

Status: ACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAD08627.1| (AE000656) conserved hypothetical protein [Helicobacter pylori 26695] Identities = 74/241 (30%), Positives = 128/241 (53%), Gaps = 8/241 (3%)

Sequence:

ATGGCGCCGCCTCGCCTGCCTCAAGCTCAATGCCTTGATGCTCCGCCCAGTCCATGCCGCCCAGCCTCGCGT
TGCGCTGGCCGCAGTAGCTGGTGCGCTAGTGAGCCGGGGCACTCCACACGACCCGAACATCGGCGACTAGTT
CATCGAACATTCAAGAGGAATCGCAGTATGTCAATCATTCATGACGCCGACCTGGCTGGCGTGCTGATGAGC
GCTAGCGCTGACGATATTAGGCTGCTGATCGACGTCATCACCGACAGCGGTAAGGGGCGGATCTCGTTGTCC
TCAGCGATTTGCCGCCAACTGACCGCGGCGAAGGAGGGTGAAGTCGGCGACTACGAGCGCGCATTGGTCGCC
GAAGAGCTCACGCGGTTTGGCGGCAACTCGCTGATGAACCTGTTCCGGGGCGGCAGCGGCGTGTCTTATGTA
GAACTGCTGAGCGATGTTGCTTCTCACGTGGGTGTCTCGAAGGCCGGGACGGGCGATTGCGCGCAGATGGAA
ATGGCCATCATCGCCAAGGTGGTCGAGCAGTCGATTGGTCGCATGAGCGAGGAAGACAAAGAAACCTTCTTT
GAGTCGATGGGGGCCAGCTACCGGCCGGGAATGGGCGCGGCTGCCCTGGCAGCGCTGATCACCAGCCTGAGT
GCCAGCTCGACTGCCTACCGGCTTGCCGCGGTAGTGGCCAGCGCAACGATGAGCAGCCTGGTCGGCCGGGGC
GTCGCGTTTGCCGGGGGCGCTGCCATGGGCAGGGGATTGGCGGTGCTCTCAGGGCCCGTCGGCTGGGCAATT
ACCGGCATCTGGACGGCCTTCGAGTTGGCCAGCCCGGCCTACCGGGTGACGGTGCCATGCGTCATCCAGATT
GGCCACATGCGCCAGAAAATGCTGCTCAAGGAGGGGTGCCCTGAATGCCACGCGTCGACTCCCGCTGGCAGT
AAGTTTTGTAGCAGTTGCGGCGCACGGCTTGCGAGTCGCTTACCTCATTCCATTCACGATTAG

Translation:

MAPPRLPQAQCLDAPPSPCRPASRCAGRSSWCASEPGHSTRPEHRRLVHRTFKRNRSMSIIHDADLAGVLMS
ASADDIRLLIDVITDSGKGRISLSSAICRQLTAAKEGEVGDYERALVAEELTRFGGNSLMNLFRGGSGVSYV
ELLSDVASHVGVSKAGTGDCAQMEMAIIAKVVEQSIGRMSEEDKETFFESMGASYRPGMGAAALAALITSLS
ASSTAYRLAAVVASATMSSLVGRGVAFAGGAAMGRGLAVLSGPVGWAITGIWTAFELASPAYRVTVPCVIQI
GHMRQKMLLKEGCPECHASTPAGSKFCSSCGARLASRLPHSIHD*

AnnotationID:7075 GeneID:7075

AnnotatorUID: danlee

Modification Date/Time: 2005-10-05 15:03:22

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs: pfam03667, COG4735

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

gi|75857021|ref|ZP_00764641.1|  COG4735: Uncharacterized protein conserved in bacteria [Vibrio sp. Ex25]
     Length=251
     Score =  142 bits (359),  Expect = 1e-32
     Identities = 79/252 (31%), Positives = 138/252 (54%), Gaps = 3/252 (1%)

gi|15646205|ref|NP_208380.1|  hypothetical protein HP1589 [Helicobacter pylori 26695]
     Length=207
     Score =  137 bits (344),  Expect = 7e-31
     Identities = 70/183 (38%), Positives = 110/183 (60%), Gaps = 3/183 (1%)

gi|23467301|ref|ZP_00122884.1|  COG4735: Uncharacterized protein conserved in bacteria [Haemophilus somnus 129PT]
     Length=252
     Score =  135 bits (340),  Expect = 2e-30
     Identities = 72/241 (29%), Positives = 129/241 (53%), Gaps = 3/241 (1%)

Structural Features:

pfam03667, UPF0174, Uncharacterized protein family (UPF0174).
             CD-Length = 206 residues,  98.5% aligned
             Score = 90.5 bits (224), Expect = 3e-19

COG4735, Uncharacterized protein conserved in bacteria [Function unknown].
             CD-Length = 211 residues,  86.3% aligned
             Score = 80.8 bits (199), Expect = 2e-16

Genomic Context:

Comment:

Same CDD as GeneID 7074

ReferenceID:13815

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:31223