ViewGene

Locus Name:
GeneID:
Location:

GeneID: 7074

TrivialName: PA14_03360

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_03360

PAO1 Ortholog Locus:

Sequence Length: 771

Protein Length: 256

Start: 307666

Stop: 306896

Strand: -

Type:

ChromosomeID: 2

Status: ACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAD08627.1| (AE000656) conserved hypothetical protein [Helicobacter pylori 26695] Identities = 83/240 (34%), Positives = 132/240 (55%), Gaps = 18/240 (7%)

Sequence:

GTGACCAGCATCGATATCAGCAATACCCGCCAGCTTCTGGAGCGTGCCAGCAATGATGATCTGGAACCTCTG
GTGGAGTACATCCTCAAGGCCAATACCGAGTCGCTGTCGAAGCAAGTGGACTTCAAGCGCAGCCACCCGGAA
CACCGCCGCTATGCCAGTTCGATCCTTGATGAGCTGCGATTGTTCGGCGGGAACAGCTTCGTCAACCTGTGG
CGTAAGAGCGGGCCTTCCTACACCGAGGTGGTCCGGGATGTTGCCAGCAAGCTTAAGGTCAAGGGGGCTGGC
TCAATGGAACTCATTGAACTGGAGGAGGCGATGGTGCAGTCGATCCTCCGTCAGGCGTTGGAGAAGTCGTCG
GGCGAGGATCGCCGCGAGCTGGAAGTGATTCTGCGCGAGGCGGGGCTCGACAAGACCAAGATGACGGCTCTG
CTGAATGGTTCGGCACTGAGTGGGCTGGTAGTGCCGACCGTAGCACGGCTAATCCTCTATCGCACTTCGACG
GTGATCGTGAACTCGATGGCTCAGCAGCTGCTTGGGCACGGGCTGCGCAGTGCGGTGGTTGCTGGGGGAACC
TTCGCTGGCGGTCGTGCCGTCGCCGCGCTAGCCGGGCCGGTCGGCTGGGTGATAGCCGGTATCTGGACCGCC
GTGGATCTGGCCGGCCCAGCCTACCGGGTCACCATCCCTTGCGTGTTGCAAATCGCCATGCTGCGTCTCAAG
GCTCGTGCCGAGGCCGCGACTGATTTCATGAATGGAGCTTTCGATGGCTGA

Translation:

MTSIDISNTRQLLERASNDDLEPLVEYILKANTESLSKQVDFKRSHPEHRRYASSILDELRLFGGNSFVNLW
RKSGPSYTEVVRDVASKLKVKGAGSMELIELEEAMVQSILRQALEKSSGEDRRELEVILREAGLDKTKMTAL
LNGSALSGLVVPTVARLILYRTSTVIVNSMAQQLLGHGLRSAVVAGGTFAGGRAVAALAGPVGWVIAGIWTA
VDLAGPAYRVTIPCVLQIAMLRLKARAEAATDFMNGAFDG*

AnnotationID:7074 GeneID:7074

AnnotatorUID: danlee

Modification Date/Time: 2005-10-05 15:03:51

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs: pfam03667, COG4735

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

gi|75857021|ref|ZP_00764641.1|  COG4735: Uncharacterized protein conserved in bacteria [Vibrio sp. Ex25]
     Length=251
     Score =  139 bits (350),  Expect = 9e-32
     Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 15/212 (7%)

gi|7465057|pir||B71800  hypothetical protein jhp1494 - Helicobacter pylori (strain J99)
gi|18203680|sp|Q9ZJ24|YF88_HELPJ  Hypothetical UPF0174 protein JHP1494
     Length=253
     Score =  137 bits (344),  Expect = 4e-31
     Identities = 83/240 (34%), Positives = 132/240 (55%), Gaps = 18/240 (7%)

Structural Features:

pfam03667, UPF0174, Uncharacterized protein family (UPF0174)..
             CD-Length = 206 residues,  99.0% aligned
             Score =  144 bits (363), Expect = 1e-35

COG4735, Uncharacterized protein conserved in bacteria [Function unknown].
             CD-Length = 211 residues,  95.7% aligned
             Score =  113 bits (285), Expect = 2e-26

Genomic Context:

Comment:

Same CDD as GeneID 7075

ReferenceID:16798

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:31221