ViewGene

Locus Name:
GeneID:
Location:

GeneID:7070
TrivialName: PA14_03320
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_03320
PAO1 Ortholog Locus:
Sequence Length:1122
Protein Length:373
Start: 303804
Stop: 302683
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: emb|CAC46725.1| (AL591789) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Sequence:
ATGACCCCCGGAAAATCACTGCCCTGGTCTGAGGTGCTTACGAGGCCGGTTGATGTCCAATTGACGATGTTT
CGTCAGGCTTCCGCTCAGCCCTGTGCTGATGATGTGAAGACAGGTTTCCGTGCGTTCTCTGCCGACCTGTTC
GCACGCGGACTGATCAGCATGGCCGAGTATGTTTCGATTTTCGGCGGTACTGTCCTGCACTGCCTGACACCC
GCCGAGTCGGGGCTGTTCCGAGACATGGATACGGGTGCCGATGCCTCGGCGCTGGCCGGGGTCTACAGCCGT
GCCAAATACGGCAGTGTGGGTGACATCCAATATCTCGCTCGACAACTCATCGATTACCTCTGCGGCGAGCTG
GATAGGCCGGACTCGCAGTGGTCGTGCCTTTTCCGGAATGCCAAGGCCTGTGGTGACAATGTGGTGATGATG
ACCACCGGTTGGCGCAACGTGCCGTCAACGGCGAACGTGCTCTATGAGATCGTGGTCGAAGAGGTCAACGTC
AAACTAGCGCATATGGCGTTGCCCACCATCATCAACGTCAAGCTGCCTAGAATTGCGCCACCTTGTGAGGAC
TACGCAAACCTCAGCACCGAGGAGCGCGAGCGCGTCAATCTGGTCCAGGATCACGTCATTCCGGCTGAAAAT
TTCTATCGTTGGAGCGGTGTGCATGTGATCTTCGGCGACGATGTGTTGGTTACCGGATCTACTGCCGACAAA
GTGCTTTATGAGTCCATGCGTAGCGGTGCAAAGTCGTTCCGCGCAATCTATCCGGTGGCGATCGATCCCCGA
GTGGCCCTGGGCGATGCCTCGGTCGAGGATCGGCTGAATAGTGTGGTGGTCGAGCAACGGCTGGACGATACC
GTTGCGGAGCTGTTGTCTGCGCGGGACTACCAACCTATCTTGCGCACCCTGCGCCTGCTGTTCGGGGAGGGC
AACCGAGAATCGCTCGCCGCCTTCCTGCCGAAGGTGCCTGCGCCGACCTGGCTGCGCCTGTACAAGTCTGCC
TTGGGTAACGAGTTTCTAGGTCAGCCGCAATGTGCTCCTTCCTTGGTGTTGCTGAGGGAGTACCTGACAAAT
GCCGGGTTGCTAAGTACCAATGGCAGGGCGATTCACCCGTGA
Translation:
MTPGKSLPWSEVLTRPVDVQLTMFRQASAQPCADDVKTGFRAFSADLFARGLISMAEYVSIFGGTVLHCLTP
AESGLFRDMDTGADASALAGVYSRAKYGSVGDIQYLARQLIDYLCGELDRPDSQWSCLFRNAKACGDNVVMM
TTGWRNVPSTANVLYEIVVEEVNVKLAHMALPTIINVKLPRIAPPCEDYANLSTEERERVNLVQDHVIPAEN
FYRWSGVHVIFGDDVLVTGSTADKVLYESMRSGAKSFRAIYPVAIDPRVALGDASVEDRLNSVVVEQRLDDT
VAELLSARDYQPILRTLRLLFGEGNRESLAAFLPKVPAPTWLRLYKSALGNEFLGQPQCAPSLVLLREYLTN
AGLLSTNGRAIHP*
AnnotationID:7070GeneID:7070
AnnotatorUID: ericdeziel
Modification Date/Time: 2004-03-08 16:04:43
Gene Name:
Confidence Code:4
GeneProduct:Hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:13806
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:31213
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 50072How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 6105145Stop: 6104024
Length: 1122
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGACCCCCGGAAAATCACTGCCCTGGTCTGAGGTGCTTACGAGGCCGGTTGATGTCCAATTGACGATGTTT
CGTCAGGCTTCCGCTCAGCCCTGTGCTGATGATGTGAAGACAGGTTTCCGTGCGTTCTCTGCCGACCTGTTC
GCACGCGGACTGATCAGCATGGCCGAGTATGTTTCGATTTTCGGCGGTACTGTCCTGCACTGCCTGACACCC
GCCGAGTCGGGGCTGTTCCGAGACATGGATACGGGTGCCGATGCCTCGGCGCTGGCCGGGGTCTACAGCCGT
GCCAAATACGGCAGTGTGGGTGACATCCAATATCTCGCTCGACAACTCATCGATTACCTCTGCGGCGAGCTG
GATAGGCCGGACTCGCAGTGGTCGTGCCTTTTCCGGAATGCCAAGGCCTGTGGTGACAATGTGGTGATGATG
ACCACCGGTTGGCGCAACGTGCCGTCAACGGCGAACGTGCTCTATGAGATCGTGGTCGAAGAGGTCAACGTC
AAACTAGCGCATATGGCGTTGCCCACCATCATCAACGTCAAGCTGCCTAGAATTGCGCCACCTTGTGAGGAC
TACGCAAACCTCAGCACCGAGGAGCGCGAGCGCGTCAATCTGGTCCAGGATCACGTCATTCCGGCTGAAAAT
TTCTATCGTTGGAGCGGTGTGCATGTGATCTTCGGCGACGATGTGTTGGTTACCGGATCTACTGCCGACAAA
GTGCTTTATGAGTCCATGCGTAGCGGTGCAAAGTCGTTCCGCGCAATCTATCCGGTGGCGATCGATCCCCGA
GTGGCCCTGGGCGATGCCTCGGTCGAGGATCGGCTGAATAGTGTGGTGGTCGAGCAACGGCTGGACGATACC
GTTGCGGAGCTGTTGTCTGCGCGGGACTACCAACCTATCTTGCGCACCCTGCGCCTGCTGTTCGGGGAGGGC
AACCGAGAATCGCTCGCCGCCTTCCTGCCGAAGGTGCCTGCGCCGACCTGGCTGCGCCTGTACAAGTCTGCC
TTGGGTAACGAGTTTCTAGGTCAGCCGCAATGTGCTCCTTCCTTGGTGTTGCTGAGGGAGTACCTGACAAAT
GCCGGGTTGCTAAGTACCAATGGCAGGGCGATTCACCCGTGA