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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAP84184.1| (AY273869) transposase [Pseudomonas aeruginosa]
Identities = 511/511 (100%), Positives = 511/511 (100%)
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Sequence:
ATGACTTCCTCGCCCAACCTTGACCAGATGACCCCGGAACAGCTTCGTGCCTTGGCGGCACAGGCGTTGCAG
TTGCAATCCCAGGTCGAGGCGATGAGCAGGAAAATCCGCAACAATGAAACCCTCATCGAACAGTTCAAGTTC
GAAATCGCTCTGCTCAAACGCCACAAGTTTGCCAAGCGCAGCGAGCAAATCAGTTCGGCGCAAGGCAGCTTG
CTGGATGACCTGCTCGACACCGACCTTGAAGCTATCGAGGCCGAGCTGAAACAACTCCTTCCAGCTTCGCCA
CAAGCCGAGCCACGGCAATCCCCGAAACGTTCGCCATTGCCGCCGCAGTTCCCGCGCACGGTGATTCGCCAC
GAACCTGAAAATACCCAATGCGCCTGCGGCTGCCAACTTCAACGCATCGGCGAAGACGTCAGCGAGAAGCTG
GATTACACGCCGGGCGTGTTTACCGTCGAGCAACATGTGAGGGGCAAATGGGCCTGCCGTCAGTGCGAAACC
CTGATCCAGGCGCCGGTGCCAGCCCAGGTTATTGATAAAGGCATCCCGACCGCAGGTTTGTTGGCCCACGTG
ATGGTGGCCAAGTTTGCCGATCACTTGCCGCTGTACAGACAGGAAAAAATCTTTGGCCGCGCCGGGCTGCCA
ATTGCCCGCTCGACCCTGGCGCAGTGGGTCGGACAAACTGGCGTGCGGCTTCAGCCACTGGTCGATGCACTG
CGTGAAGCCGTGCTGAACCAGGACGTGATCCACGCCGATGAAACACCGGTGCAAATGCTTGCACCAGGCGAG
AAGAAAACCCACCGGGTCTATGTCTGGGCCTACAGCACGACGCCGTTTTCGGCGCTCAAAGCGGTGGTTTAC
GACTTCAGCCCAAGCCGTGCCGGAGAACATGCACGCAACTTCCTAGGCGACTGGAATGGCAAGCTGGTCTGC
GACGACTTCGCTGGATACAAGGCCGGTTTTGAACAAGGCATCACTGAAATCGGCTGCATGGCTCATGCTCGC
CGCAAGTTCTTCGACCTGCATGTCGCTAACAAAAGCCAACTGGCCGAACAGGCGCTGCACTCAATTGGCGGT
TTGTACGAGGTTGAACGCCAGGCTCGGGACATGAGCAACGAAGACCGTTGGCGAATACGTCAGGAAATGGCG
GTACCGATCAGCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACCTGGTGCCCAACGGCTCGGCCACA
GCTAAAGCCCTCGACTACAGCCTGAAACGCTGGGGAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCC
ATCGACAACAATCAGGTGGAGAACCAGATACGGCCGTGGGCGCTCGGACGCTCGAACTGGTTATTTGCCGGA
TCGCTGCGCAGTGGCAAACGAGCAGCAGCTATCATGAGCCTGATCCAGTCCGCTCGCATGAACGGGCATGAT
CCGTATGCCTACCTGAAGGACGTGCTAACTCGCCTGCCGACGTTACGGTCGAAAGACATCAGCCAGTTGCTG
CCGCATCAGTGGGTACAGATCTAG |
Translation:
MTSSPNLDQMTPEQLRALAAQALQLQSQVEAMSRKIRNNETLIEQFKFEIALLKRHKFAKRSEQISSAQGSL
LDDLLDTDLEAIEAELKQLLPASPQAEPRQSPKRSPLPPQFPRTVIRHEPENTQCACGCQLQRIGEDVSEKL
DYTPGVFTVEQHVRGKWACRQCETLIQAPVPAQVIDKGIPTAGLLAHVMVAKFADHLPLYRQEKIFGRAGLP
IARSTLAQWVGQTGVRLQPLVDALREAVLNQDVIHADETPVQMLAPGEKKTHRVYVWAYSTTPFSALKAVVY
DFSPSRAGEHARNFLGDWNGKLVCDDFAGYKAGFEQGITEIGCMAHARRKFFDLHVANKSQLAEQALHSIGG
LYEVERQARDMSNEDRWRIRQEMAVPISKTLHDWMLAQRDLVPNGSATAKALDYSLKRWGALTRYLDDGAVP
IDNNQVENQIRPWALGRSNWLFAGSLRSGKRAAAIMSLIQSARMNGHDPYAYLKDVLTRLPTLRSKDISQLL
PHQWVQI* |
AnnotationID:713 | GeneID:704 |
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Modification Date/Time: |
2006-01-29 11:11:03 |
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GeneProduct: | putative transposase |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (22) Related to phage, transposon, or plasmid |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | DNA replication, recombination, modification and repair |
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Homology: | >gb|AAN70015.1|AE016640_3 (AE016790) ISPpu14, transposase Orf3 [Pseudomonas putida KT2440]
Length = 511
Score = 979 bits (2532), Expect = 0.0
Identities = 486/509 (95%), Positives = 494/509 (97%)
>gb|AAP85912.1| (AY305378) putative transposase protein [Ralstonia eutropha]
Length = 517
Score = 343 bits (881), Expect = 1e-93
Identities = 202/510 (39%), Positives = 287/510 (56%), Gaps = 28/510 (5%)
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Structural Features: | pfam03050, Transposase_25, Transposase IS66 family.
CD-Length = 199 residues, 99.0% aligned
Score = 209 bits (534), Expect = 5e-55
Identities = 96/197 (48%), Positives = 130/197 (65%), Gaps = 4/197 (2%)
COG3436, Transposase and inactivated derivatives
[DNA replication, recombination, and repair].
CD-Length = 157 residues, 100.0% aligned
Score = 110 bits (277), Expect = 3e-25
Identities = 64/161 (39%), Positives = 80/161 (49%), Gaps = 6/161 (3%) |
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